RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PINLYPA6NC86 204 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 KIR3DP1A8MWS1 328 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 AKAP10O43572 662 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 HS6ST1O60243 411 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 SLC19A2O60779 497 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 TBX19O60806 448 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 ATP6AP2O75787 350 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 ABCD3P28288 659 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 CASP6P55212 293 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 PER3P56645 1201 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 RPS6KA2Q15349 733 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 TBCELQ5QJ74 424 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 R3HCC1LQ7Z5L2 792 aaKnown RBP21.63■■□□□ 1.05
SNF8-217ENST00000576353 ZNF781Q8N8C0 355 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 OR5M3Q8NGP4 307 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 RELTQ969Z4 430 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 TUBGCP3Q96CW5 907 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 MTERF3Q96E29 417 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 AMDHD1Q96NU7 426 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 SECISBP2Q96T21 854 aaKnown RBP21.63■■□□□ 1.05
SNF8-217ENST00000576353 TTTY12Q9BZ98 90 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 GLIPR2Q9H4G4 154 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 IL1RL2Q9HB29 575 aa21.63■■□□□ 1.05
SNF8-217ENST00000576353 ANKRD33BA6NCL7 494 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 PLOD2O00469 737 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 COQ9O75208 318 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 LRATO95237 230 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 PIGAP37287 484 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 DNASE1L1P49184 302 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 RPL14P50914 215 aaKnown RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 WDR4P57081 412 aaKnown RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 KCNJ2P63252 427 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 PSPHP78330 225 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 SPPL2CQ8IUH8 684 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 FNDC5Q8NAU1 212 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 OR7G2Q8NG99 324 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 CLHC1Q8NHS4 586 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 C20orf27Q9GZN8 174 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 ANKRA2Q9H9E1 313 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 ARGLU1Q9NWB6 273 aaPredicted RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 SH3BP4Q9P0V3 963 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 GIMAP2Q9UG22 337 aa21.62■■□□□ 1.05
SNF8-217ENST00000576353 CNOT11Q9UKZ1 510 aaKnown RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 GPR55Q9Y2T6 319 aaPredicted RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.62■■□□□ 1.05
SNF8-217ENST00000576353 TRGV8A0A0C4DH27 118 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 WIPF3A6NGB9 483 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 FRG2CA6NGY1 282 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 TO15178 435 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 PDPK1O15530 556 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 GLSO94925 669 aaPredicted RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 LDLRP01130 860 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 PRPS2P11908 318 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 RPL3P39023 403 aaKnown RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 FBXW4P57775 412 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 FOXO1Q12778 655 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 MAD2L1Q13257 205 aaPredicted RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 PDE7AQ13946 482 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 NNATQ16517 81 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 HYAL4Q2M3T9 481 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 CMPK2Q5EBM0 449 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 AGBL2Q5U5Z8 902 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 PRAMEF20Q5VT98 475 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 C1QL3Q5VWW1 255 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 PAOXQ6QHF9 649 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 PRR22Q8IZ63 422 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 ZFP28Q8NHY6 868 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 MGARPQ8TDB4 240 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 DIO2Q92813 273 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 BTBD9Q96Q07 612 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 SORT1Q99523 831 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 TUBA8Q9NY65 449 aaPredicted RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 HAO1Q9UJM8 370 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 BOKQ9UMX3 212 aaPredicted RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 ZNF835Q9Y2P0 537 aa21.61■■□□□ 1.05
SNF8-217ENST00000576353 USP9XQ93008 2570 aaPredicted RBP21.61■■□□□ 1.05
SNF8-217ENST00000576353 FAM166BA8MTA8 275 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 ERN1O75460 977 aaKnown RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 PPM1BO75688 479 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 ABCB1P08183 1280 aaPredicted RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 IFI6P09912 130 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 HPCAL1P37235 193 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 MC3RP41968 323 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 PLCXD2Q0VAA5 305 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 BST1Q10588 318 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 PDCD2Q16342 344 aaPredicted RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 SMU1Q2TAY7 513 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 IL23RQ5VWK5 629 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 ANKRD26P1Q6NSI1 321 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 TMEM107Q6UX40 140 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 NUP54Q7Z3B4 507 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 LIX1Q8N485 282 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 OR52N2Q8NGI0 321 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 SPPL2AQ8TCT8 520 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 OMA1Q96E52 524 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 ELP4Q96EB1 424 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 ZBED6CLQ96FA7 236 aaPredicted RBP21.6■■□□□ 1.05
SNF8-217ENST00000576353 VSTM2LQ96N03 204 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 PSMG3-AS1Q96PY0 264 aa21.6■■□□□ 1.05
SNF8-217ENST00000576353 DDX18Q9NVP1 670 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms