RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 NDUFAF7Q7L592 441 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 MSRB3Q8IXL7 192 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 PGAM4Q8N0Y7 254 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 CLEC4FQ8N1N0 589 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 RBM15BQ8NDT2 890 aaKnown RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 NFAM1Q8NET5 270 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 NUP43Q8NFH3 380 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 OR7G1Q8NGA0 311 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 OR52R1Q8NGF1 315 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 OR8J3Q8NGG0 315 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 OR1N1Q8NGS0 311 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 FBXO27Q8NI29 283 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 PNPT1Q8TCS8 783 aaKnown RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF721Q8TF20 911 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ZFP90Q8TF47 636 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 TTC9Q92623 222 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 EXTL1Q92935 676 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 NCLNQ969V3 563 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 NEURL3Q96EH8 262 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 VMP1Q96GC9 406 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 AURKBQ96GD4 344 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 SENP5Q96HI0 755 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ANKRD27Q96NW4 1050 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 SH3GL1Q99961 368 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 HOPXQ9BPY8 73 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 WDR77Q9BQA1 342 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 THUMPD3Q9BV44 507 aaKnown RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 TRIM4Q9C037 500 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 OR10A5Q9H207 317 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 C1orf21Q9H246 121 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 RAD21L1Q9H4I0 556 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ANKRA2Q9H9E1 313 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 TPT1P8Q9HAU6 139 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF160Q9HCG1 818 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 SPAG4Q9NPE6 437 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 EQTNQ9NQ60 294 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 P4HTMQ9NXG6 502 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 PRODH2Q9UF12 536 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF639Q9UID6 485 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 FBXL4Q9UKA2 621 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 FAF1Q9UNN5 650 aaPredicted RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 PPIEQ9UNP9 301 aaKnown RBP6.23□□□□□ -1.41
PRPF8-210ENST00000574217 LHX6Q9UPM6 363 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 CORO2BQ9UQ03 480 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 POLHQ9Y253 713 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 CFL2Q9Y281 166 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 PTPRQQ9UMZ3 2332 aa6.23□□□□□ -1.41
PRPF8-210ENST00000574217 ANKRD11Q6UB99 2663 aaPredicted RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 TRBV11-1A0A0K0K1C0 115 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 PSMG1O95456 288 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 CLPSP04118 112 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 HMGN2P05204 90 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 MATN1P21941 496 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SLC6A2P23975 617 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 CPOXP36551 454 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 CRATP43155 626 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 MAGEA8P43361 318 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 KHKP50053 298 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 EMDP50402 254 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ANXA11P50995 505 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 CLCN2P51788 898 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 GPR143P51810 404 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SLC7A2P52569 658 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SLC37A1P57057 533 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 MTPNP58546 118 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SLC26A5P58743 744 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 PSME3P61289 254 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RPS26P62854 115 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 AP2B1P63010 937 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 TXNL4AP83876 142 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RHDQ02161 417 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF155Q12901 538 aaPredicted RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 FADDQ13158 208 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 DUSP8Q13202 625 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 LASP1Q14847 261 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RGNQ15493 299 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ZNHIT3Q15649 155 aaPredicted RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 DNAL1Q4LDG9 190 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RUNDC3AQ59EK9 446 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RABL3Q5HYI8 236 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 HLA-DQA1Q5Y7H0 255 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 PLAG1Q6DJT9 500 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 NANOGP8Q6NSW7 305 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 MFSD12Q6NUT3 480 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 C8orf82Q6P1X6 216 aaPredicted RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ZCCHC12Q6PEW1 402 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 HSDL2Q6YN16 418 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RINLQ6ZS11 566 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SLC29A4Q7RTT9 530 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 C6orf120Q7Z4R8 191 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
PRPF8-210ENST00000574217 RNF130Q86XS8 419 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 DEFB107AQ8IZN7 70 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 AMER2Q8N7J2 671 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF321PQ8N8H1 164 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 ZNF615Q8N8J6 731 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 CDRT4Q8N9R6 151 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 APCDD1LQ8NCL9 501 aa6.22□□□□□ -1.41
PRPF8-210ENST00000574217 SIMC1Q8NDZ2 872 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms