RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 COQ8BQ96D53 544 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 SIGLEC12Q96PQ1 595 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TAAR6Q96RI8 345 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 WWTR1Q9GZV5 400 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 NEUROD4Q9HD90 331 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 DDX18Q9NVP1 670 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TAS2R9Q9NYW1 312 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 FLNCQ14315 2725 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 A0A1W2PRB8 838 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 A8MVJ9 347 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 E9PBE3 544 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 WWP2O00308 870 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 OR2J2O76002 312 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 NEURL1O76050 574 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 RASAL1O95294 804 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 CBX7O95931 251 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 CLPSP04118 112 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 LAMP1P11279 417 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 MC3RP41968 323 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 KIR3DL1P43629 444 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 HLCSP50747 726 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 NRG3P56975 720 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 STX1BP61266 288 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 DCAF7P61962 342 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 PSPHP78330 225 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 IRX1P78414 480 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 PGS1Q32NB8 556 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 PDCD4Q53EL6 469 aaKnown RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 ZNF468Q5VIY5 522 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 ANXA8L1Q5VT79 327 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 SPINK14Q6IE38 97 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 OPN5Q6U736 354 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 OR8J2Q8NGG1 315 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 TMEM125Q96AQ2 219 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 C5orf34Q96MH7 638 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 RASL10BQ96S79 203 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 TRIM45Q9H8W5 580 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 HPF1Q9NWY4 346 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 LRFN1Q9P244 771 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 C19orf53Q9UNZ5 99 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-213ENST00000573577 GPR45Q9Y5Y3 372 aa12.52□□□□□ -0.41
RPAIN-213ENST00000573577 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 TMEM200CA6NKL6 621 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 RNASET2O00584 256 aaKnown RBP12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ANKRD28O15084 1053 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 CBX6O95503 412 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 CD46P15529 392 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 PTGER1P34995 402 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 PIGGQ5H8A4 983 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 CLEC18BQ6UXF7 455 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ZNF551Q7Z340 670 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-213ENST00000573577 MIER2Q8N344 545 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 TMEM178AQ8NBL3 297 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 OR7G2Q8NG99 324 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 OR5P2Q8WZ92 322 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ELP4Q96EB1 424 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 SCMH1Q96GD3 660 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 RILPQ96NA2 401 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 SLX1AQ9BQ83 275 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 EBF4Q9BQW3 602 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 HES7Q9BYE0 225 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 LIN28AQ9H9Z2 209 aaKnown RBP12.51□□□□□ -0.41
RPAIN-213ENST00000573577 C3orf14Q9HBI5 128 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 KLHL1Q9NR64 748 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 SDR39U1Q9NRG7 319 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-213ENST00000573577 OLAHQ9NV23 265 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 FGFR1OP2Q9NVK5 253 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ZIM2Q9NZV7 527 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 DCTN4Q9UJW0 460 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 PCDHGB4Q9UN71 923 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 TRIM33Q9UPN9 1127 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 ERVK-11Q9UQG0 969 aa12.51□□□□□ -0.41
RPAIN-213ENST00000573577 A0A0G2JND7 137 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 ANKUB1A6NFN9 424 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 TTC36A6NLP5 189 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 ACOX3O15254 700 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 CFLARO15519 480 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 SLC25A12O75746 678 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 SLC22A3O75751 556 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 CRYABP02511 175 aaKnown RBP12.5□□□□□ -0.41
RPAIN-213ENST00000573577 SP1P08047 785 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 EDN3P14138 238 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 GPX3P22352 226 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 S100A3P33764 101 aa12.5□□□□□ -0.41
RPAIN-213ENST00000573577 TMED10P49755 219 aaKnown RBP12.5□□□□□ -0.41
RPAIN-213ENST00000573577 EMDP50402 254 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms