RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 H0YC42 278 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZIC3O60481 467 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 LMX1BO60663 402 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 ABCB7O75027 752 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 IPO7O95373 1038 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 TGFB1P01137 390 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 CD8AP01732 235 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 NAGAP17050 411 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 KRT15P19012 456 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 IGFBP5P24593 272 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 CNTFP26441 200 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 MAGEA3P43357 314 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 SUCLG1P53597 346 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 TPD52P55327 224 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 B3GALT5-AS1P59052 145 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 LOXL1Q08397 574 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 KIF5AQ12840 1032 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 PGGHGQ32M88 737 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 TMEM35AQ53FP2 167 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 LIPNQ5VXI9 398 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 CYB5R2Q6BCY4 276 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 MEX3DQ86XN8 651 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 PLCZ1Q86YW0 608 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 UBQLNLQ8IYU4 475 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 MCUQ8NE86 351 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 C17orf47Q8NEP4 570 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 FNDC9Q8TBE3 224 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 PTCD3Q96EY7 689 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 NTMT1Q9BV86 223 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 ACTR6Q9GZN1 396 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 ADAM19Q9H013 955 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR10A5Q9H207 317 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 L2HGDHQ9H9P8 463 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 BARX1Q9HBU1 254 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 XAB2Q9HCS7 855 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 SLC17A6Q9P2U8 582 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 MRPS18CQ9Y3D5 142 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 RNF115Q9Y4L5 304 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 A0A1W2PP18 115 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PRAMEF25A6NGN4 478 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 B4DXG7 233 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 UBFD1O14562 309 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 CLGNO14967 610 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 CLOCKO15516 846 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 TAPBPO15533 448 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 UGT2B11O75310 529 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 TNFRSF21O75509 655 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 SLC35E2BP0CK96 405 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 SLC35E2P0CK97 266 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 IGHV4-31P0DP07 118 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PEPDP12955 493 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF37AP17032 561 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 EGR1P18146 543 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 GPX3P22352 226 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 DPP4P27487 766 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 TLX1P31314 330 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF844Q08AG5 666 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 NNATQ16517 81 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 FBXO48Q5FWF7 155 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR4C11Q6IEV9 310 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 ALKBH2Q6NS38 261 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAM214BQ7L5A3 538 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 CNTN4Q8IWV2 1026 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 ESAMQ96AP7 390 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 C11orf24Q96F05 449 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 TMEM79Q9BSE2 394 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 EFCAB11Q9BUY7 163 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 TRAF4Q9BUZ4 470 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PINK1Q9BXM7 581 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR51B5Q9H339 312 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PLSCR4Q9NRQ2 329 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 DNAJC11Q9NVH1 559 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 EHD3Q9NZN3 535 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PHF11Q9UIL8 331 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 PLCE1Q9P212 2302 aa9.36□□□□□ -0.91
CTDNEP1-202ENST00000570380 A0A1W2PR48 441 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 SLC35F4A4IF30 521 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 NCF1BA6NI72 391 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ELOA3DA6NLF2 546 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 NCF1CA8MVU1 366 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 CD3EP07766 207 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 NCF1P14598 390 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 EPORP19235 508 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 BUD31P41223 144 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 CASP2P42575 452 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 HMGCS1Q01581 520 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 LAPTM5Q13571 262 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 CRYMQ14894 314 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 PON3Q15166 354 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 TSNQ15631 228 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 CTU2Q2VPK5 515 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ELOA3BQ3SY89 546 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAM120AOSQ5T036 256 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 NCMAPQ5T1S8 102 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 DEPDC1Q5TB30 811 aa9.35□□□□□ -0.91
CTDNEP1-202ENST00000570380 KHDRBS2Q5VWX1 349 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms