RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PINLYPA6NC86 204 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 G3V3Y1 287 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ACOT7O00154 380 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ACOX3O15254 700 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 HS6ST1O60243 411 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 TBX19O60806 448 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 PEX11AO75192 247 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ATP6AP2O75787 350 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 BCKDHAP12694 445 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 NAGAP17050 411 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 BGNP21810 368 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 DRD5P21918 477 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 PPICP45877 212 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 DNASE1L1P49184 302 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 RPL14P50914 215 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 C6orf136Q5SQH8 315 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF781Q8N8C0 355 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 FAM13CQ8NE31 585 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 TUBGCP3Q96CW5 907 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 MTERF3Q96E29 417 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 SORT1Q99523 831 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ITPAQ9BY32 194 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 GLIPR2Q9H4G4 154 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 REEP4Q9H6H4 257 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 TAS2R9Q9NYW1 312 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 SPTAN1Q13813 2472 aaKnown RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 A0A087WV62 115 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 A0A0G2JMM0 328 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 A0A1W2PPB8 328 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 A0A1W2PRS3 328 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 WIPF3A6NGB9 483 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 KIR3DP1A8MWS1 328 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PLOD2O00469 737 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 LRRTM2O43300 516 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 AKAP10O43572 662 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 LRATO95237 230 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PRPS2P11908 318 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 DDX5P17844 614 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 ABCD3P28288 659 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PIGAP37287 484 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 FBXW4P57775 412 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PPIAP62937 165 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 BST1Q10588 318 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 TBCELQ5QJ74 424 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PAOXQ6QHF9 649 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 TMEM64Q6YI46 380 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 R3HCC1LQ7Z5L2 792 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC22A16Q86VW1 577 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 FNDC5Q8NAU1 212 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 OR7G2Q8NG99 324 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 OR52N2Q8NGI0 321 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 OR5M3Q8NGP4 307 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 RELTQ969Z4 430 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 PPCDCQ96CD2 204 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 AMDHD1Q96NU7 426 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 TTTY12Q9BZ98 90 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 ANKRA2Q9H9E1 313 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 IL1RL2Q9HB29 575 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 ARGLU1Q9NWB6 273 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 SH3BP4Q9P0V3 963 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 GIMAP2Q9UG22 337 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 HAO1Q9UJM8 370 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF835Q9Y2P0 537 aa12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 GPR55Q9Y2T6 319 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
HERPUD1-218ENST00000569569 ASH1LQ9NR48 2969 aaKnown RBP12.71□□□□□ -0.38
HERPUD1-218ENST00000569569 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 TO15178 435 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PDPK1O15530 556 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 SLC19A2O60779 497 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 COQ9O75208 318 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ERN1O75460 977 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PPM1BO75688 479 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 GLSO94925 669 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 LDLRP01130 860 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 ABCB1P08183 1280 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 IFI6P09912 130 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 RPL3P39023 403 aaKnown RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 CASP6P55212 293 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PER3P56645 1201 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 FOXO1Q12778 655 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PDE7AQ13946 482 aa12.7□□□□□ -0.38
HERPUD1-218ENST00000569569 PDCD2Q16342 344 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms