RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CFLARO15519 480 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 EMC8O43402 210 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 ITGA10O75578 1167 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 CPSF4O95639 269 aaKnown RBP16.65■□□□□ 0.26
COMMD4-222ENST00000568034 C1QCP02747 245 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 HOXB9P17482 250 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-222ENST00000568034 PTPN6P29350 595 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 MAP3K8P41279 467 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 KCNK10P57789 538 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 KLF10Q13118 480 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 VPS26BQ4G0F5 336 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 PIGGQ5H8A4 983 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 ZNF468Q5VIY5 522 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-222ENST00000568034 LYPD8Q6UX82 237 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 NPSR1Q6W5P4 371 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 CLEC4FQ8N1N0 589 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 C17orf47Q8NEP4 570 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 VPS37AQ8NEZ2 397 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 OR5AK3PQ8NH89 298 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 SFXN5Q8TD22 340 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 GTF2H4Q92759 462 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 WBP1Q96G27 269 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 MS4A4EQ96PG1 132 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 GAL3ST4Q96RP7 486 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 LMF1Q96S06 567 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 NXF5Q9H1B4 397 aaKnown RBP16.65■□□□□ 0.26
COMMD4-222ENST00000568034 MYLK2Q9H1R3 596 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 ZCCHC3Q9NUD5 404 aaKnown RBP16.65■□□□□ 0.26
COMMD4-222ENST00000568034 GPATCH2Q9NW75 528 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 ARMCX1Q9P291 453 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 PCDHGB7Q9Y5F8 929 aa16.65■□□□□ 0.26
COMMD4-222ENST00000568034 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 OR2J2O76002 312 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 WDPCPO95876 746 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 ALPPP05187 535 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CT45A8P0DMV1 189 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CT45A9P0DMV2 189 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CD97P48960 835 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CCT3P49368 545 aaKnown RBP16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CT45A2Q5DJT8 189 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 PAGE3Q5JUK9 113 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 ABHD17BQ5VST6 288 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 MFSD12Q6NUT3 480 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 SLC2A7Q6PXP3 512 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 IGFL3Q6UXB1 125 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 TP53INP1Q96A56 240 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 BTBD9Q96Q07 612 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 RASL10BQ96S79 203 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 RNF32Q9H0A6 362 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 EPS8L2Q9H6S3 715 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 C3orf14Q9HBI5 128 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 PLA2G3Q9NZ20 509 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 STMN3Q9NZ72 180 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 TEKT2Q9UIF3 430 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 GPR55Q9Y2T6 319 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-222ENST00000568034 ZNF451Q9Y4E5 1061 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 CSAG2Q9Y5P2 127 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 SNX8Q9Y5X2 465 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 ZFYVE26Q68DK2 2539 aa16.64■□□□□ 0.25
COMMD4-222ENST00000568034 TLN1Q9Y490 2541 aaKnown RBP16.64■□□□□ 0.25
COMMD4-222ENST00000568034 PIEZO2Q9H5I5 2752 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 RNF103-CHMP3A0A140T963 221 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 A0A1W2PP18 115 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 ADSLP30566 484 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 SOAT1P35610 550 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 PPICP45877 212 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 PRKAG1P54619 331 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 CORO7P57737 925 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 PRR5P85299 388 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 PSG6Q00889 435 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 LRRC74AQ0VAA2 488 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 ZNF155Q12901 538 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 NNATQ16517 81 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 GTDC1Q4AE62 458 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 DNAJC14Q6Y2X3 702 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 WDR53Q7Z5U6 358 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 MTDHQ86UE4 582 aaKnown RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 OR56A1Q8NGH5 318 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 C9orf43Q8TAL5 461 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 TSPEARQ8WU66 669 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 C16orf58Q96GQ5 468 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 PANX1Q96RD7 426 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 LMF2Q9BU23 707 aaKnown RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 SERHL2Q9H4I8 314 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 TRIM45Q9H8W5 580 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 EQTNQ9NQ60 294 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 ARL2BPQ9Y2Y0 163 aa16.63■□□□□ 0.25
COMMD4-222ENST00000568034 YARS2Q9Y2Z4 477 aaKnown RBP16.63■□□□□ 0.25
COMMD4-222ENST00000568034 DYTNA2CJ06 578 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 FRG2CA6NGY1 282 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 RFXANKO14593 260 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 TO15178 435 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 SLC22A2O15244 555 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 CCDC22O60826 627 aa16.62■□□□□ 0.25
COMMD4-222ENST00000568034 ERN1O75460 977 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms