RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RPL38P63173 70 aaKnown RBP23.15■■□□□ 1.3
FANCA-228ENST00000567943 CDSNQ15517 529 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 CEBPEQ15744 281 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 CHI3L2Q15782 390 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 PRSS53Q2L4Q9 553 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 GALNTL6Q49A17 601 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 RFTN2Q52LD8 501 aaPredicted RBP23.15■■□□□ 1.3
FANCA-228ENST00000567943 CES4AQ5XG92 561 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 SLC22A10Q63ZE4 541 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 FAM47EQ6ZV65 393 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 IKBIPQ70UQ0 350 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 DND1Q8IYX4 353 aaKnown RBP23.15■■□□□ 1.3
FANCA-228ENST00000567943 FAM13CQ8NE31 585 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 ZNF675Q8TD23 568 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 KAT2AQ92830 837 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 EGLN2Q96KS0 407 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 EXO1Q9UQ84 846 aaKnown RBP23.15■■□□□ 1.3
FANCA-228ENST00000567943 CFL2Q9Y281 166 aa23.15■■□□□ 1.3
FANCA-228ENST00000567943 LSM1O15116 133 aaKnown RBP23.14■■□□□ 1.29
FANCA-228ENST00000567943 BIRC5O15392 142 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 LYPLA1O75608 230 aaPredicted RBP23.14■■□□□ 1.29
FANCA-228ENST00000567943 SERPINE1P05121 402 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 DHRS4L1P0CG22 281 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 MPIP34949 423 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 PTGS2P35354 604 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 PLGLB1Q02325 96 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 NTRK2Q16620 822 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 HYAL4Q2M3T9 481 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 MTFR2Q6P444 385 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 GK5Q6ZS86 529 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 FAM9CQ8IZT9 166 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 ZNF808Q8N4W9 903 aaPredicted RBP23.14■■□□□ 1.29
FANCA-228ENST00000567943 TMEM251Q8N6I4 163 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 OR5M3Q8NGP4 307 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 FAM57AQ8TBR7 257 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 FCRL1Q96LA6 429 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 DMRTA2Q96SC8 542 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 ITPAQ9BY32 194 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 STMN4Q9H169 189 aaPredicted RBP23.14■■□□□ 1.29
FANCA-228ENST00000567943 ANKRA2Q9H9E1 313 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 IL1RL2Q9HB29 575 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 RYDENQ9NUL5 291 aaKnown RBP23.14■■□□□ 1.29
FANCA-228ENST00000567943 LIPGQ9Y5X9 500 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 DCHS2Q6V1P9 2916 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 LRBAP50851 2863 aa23.14■■□□□ 1.29
FANCA-228ENST00000567943 ITM2AO43736 263 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 HSPA4LO95757 839 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 CELA3AP09093 270 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 SDC1P18827 310 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 GRNP28799 593 aaKnown RBP23.13■■□□□ 1.29
FANCA-228ENST00000567943 MAGEA5P43359 124 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 NRG3P56975 720 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 ART3Q13508 389 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 NNATQ16517 81 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 EMC4Q5J8M3 183 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 PRAMEF20Q5VT98 475 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 RGS9BPQ6ZS82 235 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 SLC22A16Q86VW1 577 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 PRR22Q8IZ63 422 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 C17orf47Q8NEP4 570 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 GFM2Q969S9 779 aaKnown RBP23.13■■□□□ 1.29
FANCA-228ENST00000567943 CCT7Q99832 543 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 NXF5Q9H1B4 397 aaKnown RBP23.13■■□□□ 1.29
FANCA-228ENST00000567943 TAS2R7Q9NYW3 318 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 GIMAP2Q9UG22 337 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 CNOT11Q9UKZ1 510 aaKnown RBP23.13■■□□□ 1.29
FANCA-228ENST00000567943 NPFFR2Q9Y5X5 522 aa23.13■■□□□ 1.29
FANCA-228ENST00000567943 MYO1GB0I1T2 1018 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 SKAP2O75563 359 aaPredicted RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 LRATO95237 230 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 JUNP05412 331 aaKnown RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 ESRRAP11474 423 aaPredicted RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 NCBP2P52298 156 aaKnown RBP eCLIP23.12■■□□□ 1.293e-15■■■□□ 17.9
FANCA-228ENST00000567943 XKR7Q5GH72 579 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 RPTNQ6XPR3 784 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 FBXW8Q8N3Y1 598 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 ANKRD42Q8N9B4 389 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 TSSK3Q96PN8 268 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 PAIP2Q9BPZ3 127 aaKnown RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 ZNF395Q9H8N7 513 aaPredicted RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 PRODH2Q9UF12 536 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 BAIAP2L1Q9UHR4 511 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 TMED5Q9Y3A6 229 aa23.12■■□□□ 1.29
FANCA-228ENST00000567943 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.12■■□□□ 1.29
FANCA-228ENST00000567943 ATP6AP2A0A1C7CYW4 349 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 LRRC3CA6NJW4 275 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 CAPN14A8MX76 684 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 TMEM114B3SHH9 223 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 ACOT7O00154 380 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 PRRG2O14669 202 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 ATP6AP2O75787 350 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 BCAS2O75934 225 aaPredicted RBP23.11■■□□□ 1.29
FANCA-228ENST00000567943 IGHG3P01860 377 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 RFPL3SP0C7P2 107 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 EMDP50402 254 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 FBXW4P57775 412 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 ABCE1P61221 599 aaKnown RBP23.11■■□□□ 1.29
FANCA-228ENST00000567943 ARHGAP11AQ6P4F7 1023 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 CD163Q86VB7 1156 aa23.11■■□□□ 1.29
FANCA-228ENST00000567943 MARVELD2Q8N4S9 558 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms