RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ACVR2AP27037 513 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ABCD3P28288 659 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TIA1P31483 386 aaKnown RBP eCLIP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 MPIP34949 423 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SOX18P35713 384 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 PPICP45877 212 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 HTR6P50406 440 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 FBXW4P57775 412 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 DCAF7P61962 342 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 HMGCS1Q01581 520 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 DUSP2Q05923 314 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SLC18A2Q05940 514 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 C2orf80Q0P641 193 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 HEPACAMQ14CZ8 416 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 EXOSC7Q15024 291 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 CDSNQ15517 529 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LTB4RQ15722 352 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 IMPG1Q17R60 797 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TRMT12Q53H54 448 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 BEND6Q5SZJ8 279 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 WLSQ5T9L3 541 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 FAM180BQ6P0A1 224 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF585AQ6P3V2 769 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 FRMD7Q6ZUT3 714 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 NUP54Q7Z3B4 507 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TRIM46Q7Z4K8 759 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TICAM1Q8IUC6 712 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 MCEMP1Q8IX19 187 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 MARVELD2Q8N4S9 558 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 OR5M9Q8NGP3 310 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LILRB4Q8NHJ6 448 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 FAM76AQ8TAV0 307 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SPPL2AQ8TCT8 520 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF675Q8TD23 568 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 EPS8L3Q8TE67 593 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ASB5Q8WWX0 329 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 DIO2Q92813 273 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SARAFQ96BY9 339 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SDCCAG3Q96C92 435 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ERP27Q96DN0 273 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 C11orf24Q96F05 449 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 CNRIP1Q96F85 164 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 APIPQ96GX9 242 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LCORQ96JN0 433 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 RILPQ96NA2 401 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 KCNA7Q96RP8 456 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SMC6Q96SB8 1091 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SECISBP2Q96T21 854 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 MYCBPQ99417 103 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 DOHHQ9BU89 302 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ANGPTL4Q9BY76 406 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 NXF5Q9H1B4 397 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 C12orf65Q9H3J6 166 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 PFDN4Q9NQP4 134 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 SLC35C2Q9NQQ7 365 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 PNPLA3Q9NST1 481 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 GIMAP4Q9NUV9 329 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 EHD3Q9NZN3 535 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 B4GALT7Q9UBV7 327 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 PRODH2Q9UF12 536 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 WBP11Q9Y2W2 641 aaKnown RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LIPGQ9Y5X9 500 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LRRC3CA6NJW4 275 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 FIGNL2A6NMB9 653 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 TRIM13O60858 407 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 WDR1O75083 606 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 SEC22BO75396 215 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 REM1O75628 298 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 PPM1BO75688 479 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 TRAPPC6AO75865 159 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 CBX7O95931 251 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 SNRPB2P08579 225 aaKnown RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 UROSP10746 265 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 PRF1P14222 555 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 CHRNB4P30926 498 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 PTGER4P35408 488 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 CASP3P42574 277 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 KIR3DL1P43629 444 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 TRPC1P48995 793 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 EMDP50402 254 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 FOXA1P55317 472 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 NUP107P57740 925 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF763Q0D2J5 394 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 DUSP8Q13202 625 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 RPS6KA2Q15349 733 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 LIPMQ5VYY2 423 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 BICRALQ6AI39 1079 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 HDXQ7Z353 690 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 SRRM1Q8IYB3 904 aaKnown RBP6.34□□□□□ -1.39
SF3B3-209ENST00000567635 PRR22Q8IZ63 422 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 C4orf33Q8N1A6 199 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 BANPQ8N9N5 519 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 SIMC1Q8NDZ2 872 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 OR52R1Q8NGF1 315 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 OR10Q1Q8NGQ4 319 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 NEIL3Q8TAT5 605 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 KAT2AQ92830 837 aa6.34□□□□□ -1.39
SF3B3-209ENST00000567635 EXOSC8Q96B26 276 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms