RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 METTL21CQ5VZV1 264 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 OR4F3Q6IEY1 312 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 TUBA3EQ6PEY2 450 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 Q6ZS92 163 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 MSANTD1Q6ZTZ1 278 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 CYP4Z2PQ8N1L4 340 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 TMEM178AQ8NBL3 297 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 OR56A1Q8NGH5 318 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 RFWD2Q8NHY2 731 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SFXN5Q8TD22 340 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 DOK4Q8TEW6 326 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ELP4Q96EB1 424 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 LCORQ96JN0 433 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-208ENST00000567250 C5orf34Q96MH7 638 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF317Q96PQ6 595 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-208ENST00000567250 TMEM120AQ9BXJ8 343 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ITPAQ9BY32 194 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ZBTB20Q9HC78 741 aaPredicted RBP11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ZCCHC3Q9NUD5 404 aaKnown RBP11.27□□□□□ -0.61
SF3B3-208ENST00000567250 LRFN1Q9P244 771 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 PCDHGB6Q9Y5F9 930 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 SNX8Q9Y5X2 465 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 ATRXP46100 2492 aa11.27□□□□□ -0.61
SF3B3-208ENST00000567250 PRSS51A0A1B0GVH4 220 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 FAM234BA2RU67 622 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 UPK1AO00322 258 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 ERN1O75460 977 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 PSMG1O95456 288 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 C6orf47O95873 294 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 KRT16P08779 473 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 KRT20P35900 424 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 SOX3P41225 446 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 PPICP45877 212 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 EMDP50402 254 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 CDK9P50750 372 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 NR0B1P51843 470 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 POLR2JP52435 117 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 KCNK10P57789 538 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 RPP38P78345 283 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 OR1C1Q15619 314 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 SLC6A19Q695T7 634 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 TRIML2Q8N7C3 387 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 AMER2Q8N7J2 671 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 RBMXL3Q8N7X1 1067 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 ZNF441Q8N8Z8 693 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 CDRT4Q8N9R6 151 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 FAM98AQ8NCA5 519 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 PSMA8Q8TAA3 256 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 ADIPOR1Q96A54 375 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 MAGED4Q96JG8 741 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 BBC3Q96PG8 261 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 BTBD9Q96Q07 612 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 RMND5AQ9H871 391 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 TRIM45Q9H8W5 580 aaPredicted RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 FOLH1BQ9HBA9 442 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 Q9N2J8 555 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
SF3B3-208ENST00000567250 COPG1Q9Y678 874 aaKnown RBP11.26□□□□□ -0.61
SF3B3-208ENST00000567250 COL6A6A6NMZ7 2263 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 MAN1A2O60476 641 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SLC25A12O75746 678 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 F10P00742 488 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 ABCB1P08183 1280 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 NCF2P19878 526 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 DRD5P21918 477 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 LSP1P33241 339 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SOX18P35713 384 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 CD96P40200 585 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 CD97P48960 835 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 PRIM2P49643 509 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 GNGT1P63211 74 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 PLCXD2Q0VAA5 305 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 DUSP8Q13202 625 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 TP53BP2Q13625 1128 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 RCAN2Q14206 197 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 MAPKAPK3Q16644 382 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 NADK2Q4G0N4 442 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SOWAHCQ53LP3 525 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 PIGGQ5H8A4 983 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 ZCCHC12Q6PEW1 402 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 RTL4Q6ZR62 310 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 PTRH1Q86Y79 214 aaKnown RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 NUP43Q8NFH3 380 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 OR4A15Q8NGL6 344 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SPACA9Q96E40 222 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 FAM120BQ96EK7 910 aaKnown RBP11.25□□□□□ -0.61
SF3B3-208ENST00000567250 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 TEX37Q96LM6 180 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 VSTM2LQ96N03 204 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 CCDC115Q96NT0 180 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 OR52E6Q96RD3 313 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 PANX1Q96RD7 426 aa11.25□□□□□ -0.61
SF3B3-208ENST00000567250 NXF5Q9H1B4 397 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms