RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 OGFRL1Q5TC84 451 aaPredicted RBP16.51■□□□□ 0.23
HERC2-208ENST00000566635 LAPTM4BQ86VI4 370 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 SLC30A8Q8IWU4 369 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 SMYD1Q8NB12 490 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 CDS1Q92903 461 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 SLC35A4Q96G79 324 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 TREX2Q9BQ50 279 aaPredicted RBP16.51■□□□□ 0.23
HERC2-208ENST00000566635 CNPPD1Q9BV87 410 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 MAGIXQ9H6Y5 334 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 THUMPD1Q9NXG2 353 aaKnown RBP16.51■□□□□ 0.23
HERC2-208ENST00000566635 TOR4AQ9NXH8 423 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 AK5Q9Y6K8 562 aa16.51■□□□□ 0.23
HERC2-208ENST00000566635 IGKV3D-11A0A0A0MRZ8 115 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ASNA1O43681 348 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ITIH1P19827 911 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 NBL1P41271 181 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 PGDP52209 483 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 MC2RQ01718 297 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ZNF267Q14586 743 aaPredicted RBP16.5■□□□□ 0.23
HERC2-208ENST00000566635 DUSP5Q16690 384 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 GRAMD1BQ3KR37 738 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ICA1LQ8NDH6 482 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ADAMTS15Q8TE58 950 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 CDC6Q99741 560 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ADPRHL2Q9NX46 363 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 ZNF639Q9UID6 485 aa16.5■□□□□ 0.23
HERC2-208ENST00000566635 TMEM247A6NEH6 219 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 SUV39H1O43463 412 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 IFI6P09912 130 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 FCGR1AP12314 374 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 TNFRSF1BP20333 461 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 RORAP35398 523 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 ZNF155Q12901 538 aaPredicted RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 SERTAD2Q14140 314 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 ATP6AP1Q15904 470 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.49■□□□□ 0.23
HERC2-208ENST00000566635 CYP27C1Q4G0S4 372 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 GPAT3Q53EU6 434 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 LCN10Q6JVE6 187 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 VN1R1Q9GZP7 353 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 PNO1Q9NRX1 252 aaKnown RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 MKL2Q9ULH7 1088 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 ERVK-19Q9WJR5 959 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 EP300Q09472 2414 aaPredicted RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 PMS2P1A4D2B8 440 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 A8MUA0 341 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 RECKO95980 971 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 KCNJ10P78508 379 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 DCDP81605 110 aaKnown RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 EXOSC6Q5RKV6 272 aaKnown RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 FKBP9P1Q75LS8 142 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 PATL1Q86TB9 770 aaKnown RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 BPHLQ86WA6 291 aaPredicted RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 STT3BQ8TCJ2 826 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 RSPO3Q9BXY4 272 aaPredicted RBP16.49■□□□□ 0.23
HERC2-208ENST00000566635 LOXL2Q9Y4K0 774 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 CCDC88CQ9P219 2028 aa16.49■□□□□ 0.23
HERC2-208ENST00000566635 SAC3D1A6NKF1 404 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 C17orf105B2RV13 164 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 hCG_2039718K7EN88 272 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 CPNE3O75131 537 aaKnown RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 H6PDO95479 791 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 HBQ1P09105 142 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 MAPK10P53779 464 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 CRISP3P54108 245 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 SELENOWP63302 87 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 ILKQ13418 452 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 IZUMO2Q6UXV1 221 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 C16orf62Q7Z3J2 963 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 COL21A1Q96P44 957 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 DOHHQ9BU89 302 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 KLHL4Q9C0H6 718 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 AKIRIN1Q9H9L7 192 aaPredicted RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 FBXO8Q9NRD0 319 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 ABCG2Q9UNQ0 655 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 DTX4Q9Y2E6 619 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 IGLV3-12A0A075B6K2 115 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 TCRBV16S1A1N1A0A5B0 115 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 COQ9O75208 318 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 ZIC2O95409 532 aaPredicted RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 LDLRP01130 860 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 TNNI3P19429 210 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 ETV5P41161 510 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 MAGEA2P43356 314 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 TXNL4AP83876 142 aaKnown RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 VLDLRP98155 873 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 SFT2D3Q587I9 215 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 STPG1Q5TH74 334 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 HEPHL1Q6MZM0 1159 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 EPHX4Q8IUS5 362 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 ZDHHC21Q8IVQ6 265 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 CDRT4Q8N9R6 151 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 PIK3R3Q92569 461 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 VPS50Q96JG6 964 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 CMKLR1Q99788 373 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 CIB1Q99828 191 aa16.48■□□□□ 0.23
HERC2-208ENST00000566635 PELOQ9BRX2 385 aaKnown RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 SOX17Q9H6I2 414 aaPredicted RBP16.48■□□□□ 0.23
HERC2-208ENST00000566635 GIN1Q9NXP7 522 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms