RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SLC22A3O75751 556 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 LRATO95237 230 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 RAB3DO95716 219 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 STOMP27105 288 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 AVPR1AP37288 418 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 NUDT6P53370 316 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 HNRNPA0Q13151 305 aaKnown RBP2.78□□□□□ -1.97
CHD9-218ENST00000566029 METAP1DQ6UB28 335 aaPredicted RBP2.78□□□□□ -1.97
CHD9-218ENST00000566029 GLCCI1Q86VQ1 547 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 UNC93AQ86WB7 457 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 ADHFE1Q8IWW8 467 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 ATPAF2Q8N5M1 289 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 OR51L1Q8NGJ5 315 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 AKR7LQ8NHP1 331 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 PROKR1Q8TCW9 393 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 MRPS24Q96EL2 167 aaKnown RBP2.78□□□□□ -1.97
CHD9-218ENST00000566029 RNF125Q96EQ8 232 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 LIMD1Q9UGP4 676 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 USP18Q9UMW8 372 aa2.78□□□□□ -1.97
CHD9-218ENST00000566029 PRAMEF33A0A0G2JMD5 474 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PRAMEF10O60809 474 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CREG1O75629 220 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 POP4O95707 220 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ADAP00813 363 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 C6P13671 934 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RAB3BP20337 219 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CD1BP29016 333 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CHI3L1P36222 383 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CRYBB2P43320 205 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ALDH9A1P49189 494 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ARFIP1P53367 373 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 IL24Q13007 206 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 BOP1Q14137 746 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 SERTAD2Q14140 314 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ATP6AP1LQ52LC2 224 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NHLRC3Q5JS37 347 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PSTKQ8IV42 348 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TM9SF4Q92544 642 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RAB7BQ96AH8 199 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CREB3L1Q96BA8 519 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MYOCQ99972 504 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SPATA5L1Q9BVQ7 753 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 COA1Q9GZY4 146 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 IKZF5Q9H5V7 419 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF275Q9NSD4 429 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CALML5Q9NZT1 146 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CCDC167Q9P0B6 97 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CCL27Q9Y4X3 112 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 EVPLQ92817 2033 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MYH14Q7Z406 1995 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TMEM265A0A087WTH1 108 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 EFCAB7A8K855 629 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 H0YIV9 168 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 APEHP13798 732 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 JUPP14923 745 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ATP5C1P36542 298 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 GNALP38405 381 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HSPA7P48741 367 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NRG1Q02297 640 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 POM121L1PQ3SYA9 428 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CDNFQ49AH0 187 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HIST2H2AA3Q6FI13 130 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KCNJ9Q92806 393 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MYO19Q96H55 970 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FBXO44Q9H4M3 255 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 C14orf105Q9NVL8 296 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PIPOXQ9P0Z9 390 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SCN2AQ99250 2005 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MIA3Q5JRA6 1907 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 G3V2T6 193 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KLK3P07288 261 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 LINC00032P0C843 101 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CD1DP15813 335 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TSPAN8P19075 237 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 EPHA2P29317 976 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DCDC1P59894 354 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FOXK2Q01167 660 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF177Q13360 481 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TPBGQ13641 420 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 UNC5DQ6UXZ4 953 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SLC13A3Q8WWT9 602 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DIRAS2Q96HU8 199 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DCAF13Q9NV06 445 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 SUSD2Q9UGT4 822 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FKBPLQ9UIM3 349 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ASB1Q9Y576 335 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PRRT4C9JH25 899 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 K7EPK0 472 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AQP7O14520 342 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ATG12O94817 140 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF432O94892 652 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HTR3BO95264 441 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AIFM1O95831 613 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NDUFS1P28331 727 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AKT1P31749 480 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MECP2P51608 486 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 RBBP4Q09028 425 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SQSTM1Q13501 440 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms