RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ZNF615Q8N8J6 731 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 OR52R1Q8NGF1 315 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 KAT2AQ92830 837 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 SDCCAG3Q96C92 435 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CNRIP1Q96F85 164 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 ATP6V1G3Q96LB4 118 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 DOHHQ9BU89 302 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 ITPAQ9BY32 194 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 NXF5Q9H1B4 397 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 SIRT5Q9NXA8 310 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 ENTPD4Q9Y227 616 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 TRAF6Q9Y4K3 522 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CCL27Q9Y4X3 112 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 POLR3HQ9Y535 204 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 DNAJC15Q9Y5T4 150 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CSMD1Q96PZ7 3565 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 NPIPB8E9PQR5 432 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 GLSO94925 669 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ANXA4P09525 319 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 RFPL3SP0C7P2 107 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 GPX3P22352 226 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 GRK2P25098 689 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 TRPC1P48995 793 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 MAN2A2P49641 1150 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 NRG3P56975 720 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 C2orf80Q0P641 193 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 MGAT2Q10469 447 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 FOXO1Q12778 655 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 DUSP8Q13202 625 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ART3Q13508 389 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC10A1Q14973 349 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 CHI3L2Q15782 390 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 GALNT18Q6P9A2 607 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 RGS9BPQ6ZS82 235 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 FBXW8Q8N3Y1 598 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 PPP1R14CQ8TAE6 165 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 TUBB1Q9H4B7 451 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 ZDHHC11Q9H8X9 412 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 PNPLA3Q9NST1 481 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 GIMAP4Q9NUV9 329 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 EHD3Q9NZN3 535 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 CNOT11Q9UKZ1 510 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 BOKQ9UMX3 212 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 PTGDR2Q9Y5Y4 395 aa12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-204ENST00000565023 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.4
VPS9D1-204ENST00000565023 CAPN14A8MX76 684 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TMEM114B3SHH9 223 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TMEM233B4DJY2 109 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 E9PLN8 166 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 ADAM10O14672 748 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TP53I11O14683 189 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 ITM2AO43736 263 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 SASH3O75995 380 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 RSL1D1O76021 490 aaKnown RBP12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 CLDN14O95500 239 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 CBX7O95931 251 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 CHEK2O96017 543 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 S1PR1P21453 382 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 BGNP21810 368 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 PRPH2P23942 346 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 MASP1P48740 699 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 MAP4K2Q12851 820 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 HEPACAMQ14CZ8 416 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 RPS6KA2Q15349 733 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 NTRK2Q16620 822 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 GXYLT1Q4G148 440 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TTMPQ5BVD1 217 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 SH2D4BQ5SQS7 431 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 HHATQ5VTY9 493 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TMEM198Q66K66 360 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 XKRXQ6PP77 449 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TRILQ7L0X0 811 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 EID3Q8N140 333 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 OR9A2Q8NGT5 310 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TP53INP1Q96A56 240 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 METTL2AQ96IZ6 378 aaKnown RBP12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 ZNF681Q96N22 645 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 TP63Q9H3D4 680 aaPredicted RBP12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 PROK2Q9HC23 129 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 NKIRAS1Q9NYS0 192 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 CNIH4Q9P003 139 aa12.52□□□□□ -0.41
VPS9D1-204ENST00000565023 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms