RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 LPCAT4Q643R3 524 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 LAIR1Q6GTX8 287 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FAM180BQ6P0A1 224 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 TNFAIP8L2Q6P589 184 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ENPP6Q6UWR7 440 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 TMEM107Q6UX40 140 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ZBTB49Q6ZSB9 765 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 PRSS41Q7RTY9 318 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 DGLUCYQ7Z3D6 616 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ARMC8Q8IUR7 673 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ZDHHC21Q8IVQ6 265 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ZC3H7AQ8IWR0 971 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ST13P4Q8IZP2 240 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 CLEC4FQ8N1N0 589 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 OR2L13Q8N349 312 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 HORMAD2Q8N7B1 307 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 NUP43Q8NFH3 380 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 OR9A2Q8NGT5 310 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 NFKBIDQ8NI38 313 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 BBS10Q8TAM1 723 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FKBP10Q96AY3 582 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 MMABQ96EY8 250 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 GFM1Q96RP9 751 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF347Q96SE7 839 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 CSF3RQ99062 836 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 DOHHQ9BU89 302 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 RSRP1Q9BUV0 290 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 GTPBP2Q9BX10 602 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ACTRT3Q9BYD9 372 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SEMA6AQ9H2E6 1030 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 OR51I1Q9H343 314 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 LRRN3Q9H3W5 708 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 CACYBPQ9HB71 228 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 IL1RAPQ9NPH3 570 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FGF21Q9NSA1 209 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 STARD5Q9NSY2 213 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 TRPC4Q9UBN4 977 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 RAB26Q9ULW5 256 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 PADI2Q9Y2J8 665 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 PCDHGB7Q9Y5F8 929 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 V9GYQ6 96 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 UNC13CQ8NB66 2214 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 LY6G6EA0A0G2JKS1 128 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 A0A1B0GX78 115 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 TTC36A6NLP5 189 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 WASHC1A8K0Z3 465 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PATE3B3GLJ2 98 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 LINC01387J3KSC0 135 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 HMGN4O00479 90 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 DYRK3O43781 588 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 FGF17O60258 216 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 OR10H2O60403 315 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PLOD3O60568 738 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 DPM1O60762 260 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 CTNSO60931 367 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 AK1P00568 194 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 BCHEP06276 602 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 HBQ1P09105 142 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 TFPTP0C1Z6 253 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 NR2F1P10589 423 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ETS2P15036 469 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF23P17027 643 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 GALNSP34059 522 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PRKAG1P54619 331 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 HPCAP84074 193 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 CFHR1Q03591 330 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 EEF1A2Q05639 463 aaKnown RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 EPS8Q12929 822 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 SLC13A2Q13183 592 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 IFI44LQ53G44 452 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 CYBRD1Q53TN4 286 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF628Q5EBL2 1059 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF385CQ66K41 422 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 HMBOX1Q6NT76 420 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PPP4R4Q6NUP7 873 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PIWIL3Q7Z3Z3 882 aaKnown RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 AMIGO2Q86SJ2 522 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ZDHHC13Q8IUH4 622 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 OR5T3Q8NGG3 340 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 IFI44Q8TCB0 444 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ADAMTS15Q8TE58 950 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 SLC38A5Q8WUX1 472 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 GEMIN6Q8WXD5 167 aaKnown RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 MAL2Q969L2 176 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 ZNF501Q96CX3 271 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 RBM18Q96H35 190 aaKnown RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 TMEM19Q96HH6 336 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 VPS50Q96JG6 964 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 CIB1Q99828 191 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 NUDT22Q9BRQ3 303 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 SLC7A5P2Q9GIP4 190 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 PRTFDC1Q9NRG1 225 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 GIN1Q9NXP7 522 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 C19orf53Q9UNZ5 99 aaPredicted RBP9.08□□□□□ -0.96
UBFD1-202ENST00000563366 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 U3KQA8 63 aa9.08□□□□□ -0.96
UBFD1-202ENST00000563366 RALGAPA1Q6GYQ0 2036 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms