RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 H0YC42 278 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 TNFRSF21O75509 655 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 WDR47O94967 919 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 FTCDO95954 541 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 CT62P0C5K7 136 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC25A16P16260 332 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 NAGAP17050 411 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 ITGA2P17301 1181 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 EPORP19235 508 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 GPX3P22352 226 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 HPDP32754 393 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 MAGEA6P43360 314 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SUCLG1P53597 346 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 TPD52P55327 224 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 RPS13P62277 151 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 IRX1P78414 480 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 CDKL1Q00532 357 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 TNFRSF17Q02223 184 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 E2F2Q14209 437 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 FGFBP1Q14512 234 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SETDB1Q15047 1291 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 NRF1Q16656 503 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 CYP1B1Q16678 543 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 EXOC3L2Q2M3D2 409 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 HSP90AA5PQ58FG0 334 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 ANKRD22Q5VYY1 191 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 C11orf71Q6IPW1 123 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 AAGABQ6PD74 315 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 DRICH1Q6PGQ1 229 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 C4orf22Q6V702 233 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 PEX26Q7Z412 305 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 CNGA4Q8IV77 575 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 UBL4BQ8N7F7 174 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 C17orf47Q8NEP4 570 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 KBTBD8Q8NFY9 601 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SGMS2Q8NHU3 365 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 FNDC9Q8TBE3 224 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 TANKQ92844 425 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 RIT1Q92963 219 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 ZMYND19Q96E35 227 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SFXN2Q96NB2 322 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 PELOQ9BRX2 385 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SORBS1Q9BX66 1292 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 TRIM2Q9C040 744 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 ROGDIQ9GZN7 287 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 EHD1Q9H4M9 534 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 METTL7AQ9H8H3 244 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 C20orf96Q9NUD7 363 aaPredicted RBP6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 SPACA6W5XKT8 324 aa6.91□□□□□ -1.3
HERPUD1-206ENST00000563343 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SDR42E2A6NKP2 422 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 C17orf51A8MQB3 221 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 AKR1B15C9JRZ8 316 aaPredicted RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 GOLGA6L19H0YKK7 550 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CLOCKO15516 846 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 TCF21O43680 179 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 UGT2B11O75310 529 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 AQP8O94778 261 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 GPR75O95800 540 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 AHSGP02765 367 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 TPM1P09493 284 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CCDC175P0C221 793 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 PSMB1P20618 241 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 IL11P20809 199 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 S1PR1P21453 382 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CNTFP26441 200 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 DPP4P27487 766 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 MAGEA3P43357 314 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 NUDT6P53370 316 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 NRG3P56975 720 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 HMGCS1Q01581 520 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 TGM3Q08188 693 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SLAMF1Q13291 335 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SQLEQ14534 574 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 PON3Q15166 354 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 PLCZ1Q86YW0 608 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CCDC170Q8IYT3 715 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 KRT78Q8N1N4 520 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF525Q8N782 197 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SRFBP1Q8NEF9 429 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 OR6K3Q8NGY3 331 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CALML6Q8TD86 181 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF473Q8WTR7 871 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 RNF138Q8WVD3 245 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 ANKRD7Q92527 254 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 RHBDF1Q96CC6 855 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 OMA1Q96E52 524 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 VPS39Q96JC1 886 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SIGLEC10Q96LC7 697 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 SERPINB12Q96P63 405 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 TMEM79Q9BSE2 394 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 NTMT1Q9BV86 223 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 PINK1Q9BXM7 581 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 MANSC1Q9H8J5 431 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms