RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LNP1A1A4G5 178 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 G3V2T6 193 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 DSCR3O14972 297 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 SLITRK5O94991 958 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF883P0CG24 379 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ACP2P11117 423 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 S1PR1P21453 382 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 DCTP40126 519 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ARSFP54793 590 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 HSD17B7P56937 341 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ACY1Q03154 408 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 MAP4K2Q12851 820 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 MED21Q13503 144 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 EXOSC6Q5RKV6 272 aaKnown RBP16.86■□□□□ 0.29
COMMD4-208ENST00000563220 C1orf189Q5VU69 101 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 STK32CQ86UX6 486 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 ZDHHC13Q8IUH4 622 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 SLC9A6Q92581 669 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 DPYSL5Q9BPU6 564 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 CXorf21Q9HAI6 301 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 NECTIN3Q9NQS3 549 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 GIN1Q9NXP7 522 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 NDUFAF4Q9P032 175 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 SH3GLB1Q9Y371 365 aa16.86■□□□□ 0.29
COMMD4-208ENST00000563220 NTN3O00634 580 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 DENRO43583 198 aaKnown RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 PDE9AO76083 593 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 H6PDO95479 791 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 CBX7O95931 251 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 IFI6P09912 130 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 HSPA13P48723 471 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 DUSP8Q13202 625 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 PUM1Q14671 1186 aaKnown RBP eCLIP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 NHSL2Q5HYW2 709 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 ANKRD34AQ69YU3 496 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 OR5K1Q8NHB7 308 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 MAGEE2Q8TD90 523 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 RBM18Q96H35 190 aaKnown RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 CNDP2Q96KP4 475 aaKnown RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 OR6C1Q96RD1 312 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 GFM1Q96RP9 751 aaKnown RBP16.85■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF607Q96SK3 696 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 C8orf4Q9NR00 106 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 BAG5Q9UL15 447 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 CDC14AQ9UNH5 594 aa16.85■□□□□ 0.29
COMMD4-208ENST00000563220 DUXAA6NLW8 204 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 BMP10O95393 424 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 FESP07332 822 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 UBTFL6P0CB48 400 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 GRK6P43250 576 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 KCNJ5P48544 419 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 DSG2Q14126 1118 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 DUSP5Q16690 384 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 YOD1Q5VVQ6 348 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HEPHL1Q6MZM0 1159 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 MED25Q71SY5 747 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HMGN2P46Q86SG4 172 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SLITRK4Q8IW52 837 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 GALNT12Q8IXK2 581 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 VWA5B2Q8N398 1253 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SVOPLQ8N434 492 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 BBS10Q8TAM1 723 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 APOBEC4Q8WW27 367 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 CDS1Q92903 461 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 RIT1Q92963 219 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 BARD1Q99728 777 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SLC38A1Q9H2H9 487 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 ZNF304Q9HCX3 659 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 LIPT1Q9Y234 373 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 PCDHGB2Q9Y5G2 931 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 A0A0G2JPF8 293 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 A0A1B0GX78 115 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HNRNPCL2B2RXH8 293 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HNRNPCL3B7ZW38 293 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HRKO00198 91 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 E2F6O75461 281 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 ZIC2O95409 532 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 TIAF1O95411 115 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 LDOC1O95751 146 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 HNRNPCL4P0DMR1 293 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 PRKACGP22612 351 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 YAP1P46937 504 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 STT3AP46977 705 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 CHRNEQ04844 493 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 GNA13Q14344 377 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 ATAD3BQ5T9A4 648 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 OR52R1Q8NGF1 315 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 GEMIN6Q8WXD5 167 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 ZG16BQ96DA0 208 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 DGAT2Q96PD7 388 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 TRNT1Q96Q11 434 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 OSBPL11Q9BXB4 747 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 AMBRA1Q9C0C7 1298 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 YIPF3Q9GZM5 350 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SMURF2Q9HAU4 748 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SIDT1Q9NXL6 827 aaKnown RBP16.84■□□□□ 0.29
COMMD4-208ENST00000563220 SEC14L3Q9UDX4 400 aa16.84■□□□□ 0.29
COMMD4-208ENST00000563220 A8MVJ9 347 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 FCMRO60667 390 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms