RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LILRB3O75022 631 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 ULK1O75385 1050 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 BPIP17213 487 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SDHBP21912 280 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 LCN1P31025 176 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 OR1E2P47887 323 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 HNMTP50135 292 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 CLDN8P56748 225 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 RBBP4Q09028 425 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 ADAM15Q13444 863 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 FIP1L1Q6UN15 594 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 ZNF621Q6ZSS3 439 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 TSPAN33Q86UF1 283 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 BVESQ8NE79 360 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 IER2Q9BTL4 223 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 MED18Q9BUE0 208 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SLC25A19Q9HC21 320 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 LSM7Q9UK45 103 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 PPT2Q9UMR5 302 aa13.28□□□□□ -0.28
GTF3C1-203ENST00000562609 FAM170BA6NMN3 283 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 SLC28A1O00337 649 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 OLFM2O95897 454 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 NUDT7P0C024 238 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 IL2P60568 153 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 NTRK2Q16620 822 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 C3orf38Q5JPI3 329 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 PLPP4Q5VZY2 271 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 KREMEN2Q8NCW0 462 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 OR5T2Q8NGG2 359 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 OR2M2Q96R28 347 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 ZBP1Q9H171 429 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 ZNF768Q9H5H4 540 aaKnown RBP13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 PLCL2Q9UPR0 1127 aa13.27□□□□□ -0.28
GTF3C1-203ENST00000562609 LEFTY2O00292 366 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 KDM4BO94953 1096 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 FGF2P09038 288 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 FEN1P39748 380 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 CAPZA2P47755 286 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 CENPAP49450 140 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 TTPAP49638 278 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 TSPAN5P62079 268 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 DSG2Q14126 1118 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 ARHGAP15Q53QZ3 475 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 PDSS1Q5T2R2 415 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 KRT74Q7RTS7 529 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 BCDIN3DQ7Z5W3 292 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 PAQR7Q86WK9 346 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 LAS2Q8IYD9 372 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 C1orf52Q8N6N3 182 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 MOSPD2Q8NHP6 518 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 CD200R1Q8TD46 325 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 PANX1Q96RD7 426 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 ATF6BQ99941 703 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 MED9Q9NWA0 146 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 DPP7Q9UHL4 492 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 TINAGQ9UJW2 476 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 POMT2Q9UKY4 750 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 SLC9A8Q9Y2E8 581 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 HCFC2Q9Y5Z7 792 aa13.27□□□□□ -0.29
GTF3C1-203ENST00000562609 SSNA1O43805 119 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 NDUFS6O75380 124 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF821O75541 412 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 TGM6O95932 706 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 OPN1SWP03999 348 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 TACR1P25103 407 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 HLA-FP30511 346 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 HNF1BP35680 557 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 HSPA7P48741 367 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 BCL2L1Q07817 233 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 NCF4Q15080 339 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 RFLNAQ6ZTI6 216 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 LAPTM4BQ86VI4 370 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 TMEM25Q86YD3 366 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 BMPERQ8N8U9 685 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 FAM46DQ8NEK8 389 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 MAL2Q969L2 176 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ASB8Q9H765 288 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ZFYVE1Q9HBF4 777 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 EDARQ9UNE0 448 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ZAR1LA6NP61 321 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 SELENOFO60613 162 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 CTSAP10619 480 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 JUPP14923 745 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 PTBP1P26599 531 aaKnown RBP eCLIP13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 BTCP35070 178 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 DEFA5Q01523 94 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 PABPC1L2AQ5JQF8 200 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 MEDAGQ5VYS4 303 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 OR4A15Q8NGL6 344 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 MAPKAP1Q9BPZ7 522 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 DOHHQ9BU89 302 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 NLNQ9BYT8 704 aa13.26□□□□□ -0.29
GTF3C1-203ENST00000562609 CIPCQ9C0C6 399 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms