RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 HMBOX1Q6NT76 420 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 C16orf62Q7Z3J2 963 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 WDR53Q7Z5U6 358 aaPredicted RBP13.34□□□□□ -0.27
CNN2-204ENST00000562075 KRT73Q86Y46 540 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 ANKFN1Q8N957 763 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 TMEM102Q8N9M5 508 aaPredicted RBP13.34□□□□□ -0.27
CNN2-204ENST00000562075 CDRT4Q8N9R6 151 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 SLC38A9Q8NBW4 561 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 SIMC1Q8NDZ2 872 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 OR52R1Q8NGF1 315 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 OR10Q1Q8NGQ4 319 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 LZICQ8WZA0 190 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 TSLPQ969D9 159 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 TAMM41Q96BW9 452 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 ZNF578Q96N58 590 aaPredicted RBP13.34□□□□□ -0.27
CNN2-204ENST00000562075 ZNF607Q96SK3 696 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 PNO1Q9NRX1 252 aaKnown RBP13.34□□□□□ -0.27
CNN2-204ENST00000562075 AGPAT4Q9NRZ5 378 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 LOXL2Q9Y4K0 774 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 PCDHGA1Q9Y5H4 931 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
CNN2-204ENST00000562075 IGKV3D-11A0A0A0MRZ8 115 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 SYNDIG1LA6NDD5 238 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 DYRK3O43781 588 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 LDLRP01130 860 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 AGXTP21549 392 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 TGM1P22735 817 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 RORAP35398 523 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 CRYBA2P53672 197 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 HPCAP84074 193 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 FUT5Q11128 374 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 MAPK11Q15759 364 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 ZCCHC12Q6PEW1 402 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 PIP4P1Q86T03 277 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 SLC16A11Q8NCK7 471 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 CATSPER1Q8NEC5 780 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 STT3BQ8TCJ2 826 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 CDS1Q92903 461 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 DOHHQ9BU89 302 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 TGIF2Q9GZN2 237 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 VN1R1Q9GZP7 353 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 CALML5Q9NZT1 146 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
CNN2-204ENST00000562075 ZNF639Q9UID6 485 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 ERVK-19Q9WJR5 959 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 LIPT1Q9Y234 373 aa13.33□□□□□ -0.28
CNN2-204ENST00000562075 IGLV3-12A0A075B6K2 115 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 PRAMEF27A3QJZ7 478 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 A8MUA0 341 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 C17orf105B2RV13 164 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 MEN1O00255 615 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CLOCKO15516 846 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 PRAMEF2O60811 474 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CSO75390 466 aaKnown RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 DEAF1O75398 565 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 ONECUT2O95948 504 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CHRM4P08173 479 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ZGLP1P0C6A0 271 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 S1PR1P21453 382 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 SSTR4P31391 388 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CLDN6P56747 220 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 DUSP8Q13202 625 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 NSDHLQ15738 373 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 DUSP5Q16690 384 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ISXQ2M1V0 245 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 PRAMEF8Q5VWM4 474 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 PRAMEF7Q5VXH5 474 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CDCP2Q5VXM1 449 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ZNF385CQ66K41 422 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ZDHHC21Q8IVQ6 265 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 TMEM151BQ8IW70 566 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 COX18Q8N8Q8 333 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 CENPNQ96H22 339 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 COL21A1Q96P44 957 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 TRNT1Q96Q11 434 aaKnown RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 STACQ99469 402 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
CNN2-204ENST00000562075 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 KLHL4Q9C0H6 718 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 PIGUQ9H490 435 aa13.32□□□□□ -0.28
CNN2-204ENST00000562075 FOLH1BQ9HBA9 442 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms