RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC22A3O75751 556 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SORBS2O94875 1100 aaKnown RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SOX30O94993 753 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 IL6P05231 212 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 VIMP08670 466 aaKnown RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CT45A8P0DMV1 189 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CT45A9P0DMV2 189 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 TROVE2P10155 538 aaKnown RBP eCLIP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 PTGER1P34995 402 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 MC3RP41968 323 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 KIR3DL1P43629 444 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CYB561P49447 251 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ARG2P78540 354 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 PSG6Q00889 435 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NFATC3Q12968 1075 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF169Q14929 603 aaPredicted RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 RPS6KA2Q15349 733 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 INAQ16352 499 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF791Q3KP31 576 aaPredicted RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NADK2Q4G0N4 442 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CT45A2Q5DJT8 189 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SPANXN4Q5MJ08 99 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 EXOSC6Q5RKV6 272 aaKnown RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF468Q5VIY5 522 aaPredicted RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ANXA8L1Q5VT79 327 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 HLA-DQA1Q5Y7H0 255 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CGB2Q6NT52 195 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 MSANTD1Q6ZTZ1 278 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 MIER2Q8N344 545 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 Q8NA96 180 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 GOLM1Q8NBJ4 401 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CATSPER1Q8NEC5 780 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 VPS37AQ8NEZ2 397 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 OR52R1Q8NGF1 315 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 GOT1L1Q8NHS2 421 aaPredicted RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 RFWD2Q8NHY2 731 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SLC22A8Q8TCC7 542 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NUDT8Q8WV74 236 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ASB15Q8WXK1 588 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 MOAP1Q96BY2 351 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NTNG2Q96CW9 530 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 LCORQ96JN0 433 aaPredicted RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SGCZQ96LD1 299 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 VSTM2LQ96N03 204 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 SIGLEC12Q96PQ1 595 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 TRIM4Q9C037 500 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ZNF385DQ9H6B1 395 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ANKRA2Q9H9E1 313 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 LIN28AQ9H9Z2 209 aaKnown RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NEUROD4Q9HD90 331 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 NPHS2Q9NP85 383 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 MRGBPQ9NV56 204 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 FAM120CQ9NX05 1096 aaKnown RBP8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 PLA2G3Q9NZ20 509 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 LRFN1Q9P244 771 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 KLHL14Q9P2G3 628 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 BTNL2Q9UIR0 455 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 ERVK-11Q9UQG0 969 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 DTX4Q9Y2E6 619 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 CFAP46Q8IYW2 2715 aa8.9□□□□□ -0.98
RABGGTA-221ENST00000561055 PRRC2CQ9Y520 2896 aaKnown RBP8.9□□□□□ -0.99
RABGGTA-221ENST00000561055 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM234BA2RU67 622 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FRG2CA6NGY1 282 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 ERN1O75460 977 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 C6orf47O95873 294 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 PGRP06401 933 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 SP1P08047 785 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FBXO45P0C2W1 286 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 S100A3P33764 101 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 CASRP41180 1078 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 SOX3P41225 446 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 CDK9P50750 372 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 NR0B1P51843 470 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 HBA1P69905 142 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 HSPB3Q12988 150 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 OR1C1Q15619 314 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 NTRK2Q16620 822 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 PGS1Q32NB8 556 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM174BQ3ZCQ3 159 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 OR4F3Q6IEY1 312 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM81Q6P7N7 255 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 C16orf47Q6ZP98 133 aaPredicted RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TAGAPQ8N103 731 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM156Q8N614 296 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 SFXN5Q8TD22 340 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FAM120BQ96EK7 910 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 GIMAP5Q96F15 307 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 CHMP6Q96FZ7 201 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 CCDC115Q96NT0 180 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 SECISBP2Q96T21 854 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 ZBTB18Q99592 522 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 BARD1Q99728 777 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 LMF2Q9BU23 707 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 TMEM120AQ9BXJ8 343 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 ITPAQ9BY32 194 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 NXF5Q9H1B4 397 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 FOLH1BQ9HBA9 442 aa8.89□□□□□ -0.99
RABGGTA-221ENST00000561055 SH2D2AQ9NP31 389 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms