RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ATAD3BQ5T9A4 648 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 MFSD12Q6NUT3 480 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 TNFAIP8L2Q6P589 184 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 FAM111BQ6SJ93 734 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF517Q6ZMY9 492 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 CBLL1Q75N03 491 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 EIF3MQ7L2H7 374 aaKnown RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 OR7G1Q8NGA0 311 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 OR14A16Q8NHC5 309 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 NFKBIDQ8NI38 313 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SLC38A5Q8WUX1 472 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 CANT1Q8WVQ1 401 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 PMM1Q92871 262 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 MAL2Q969L2 176 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 PPWD1Q96BP3 646 aaKnown RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 MAGED4Q96JG8 741 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 OR7D2Q96RA2 312 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF607Q96SK3 696 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 STACQ99469 402 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 CTRCQ99895 268 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SPATA5L1Q9BVQ7 753 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 BTBD2Q9BX70 525 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 FAM117AQ9C073 453 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 PIGUQ9H490 435 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SERHL2Q9H4I8 314 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 BCL2L10Q9HD36 194 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 NECTIN3Q9NQS3 549 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 DUSP22Q9NRW4 184 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SLC22A11Q9NSA0 550 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 ADPRHL2Q9NX46 363 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 C6orf203Q9P0P8 240 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 IFT80Q9P2H3 777 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 GPN3Q9UHW5 284 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 NXT1Q9UKK6 140 aaKnown RBP8.04□□□□□ -1.12
TRAF3-209ENST00000560463 MKL2Q9ULH7 1088 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 SATB2Q9UPW6 733 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 CFL2Q9Y281 166 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 DMXL1Q9Y485 3027 aa8.04□□□□□ -1.12
TRAF3-209ENST00000560463 AHCTF1Q8WYP5 2266 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 A0A0G2JPF8 293 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HNRNPCL2B2RXH8 293 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HNRNPCL3B7ZW38 293 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 C9J4A7 227 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 H3BNX3 289 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SUV39H1O43463 412 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 JRKO75564 520 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SERPINB7O75635 380 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CBX7O95931 251 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 RECKO95980 971 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 AK1P00568 194 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 BCHEP06276 602 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HEXBP07686 556 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 GUSBP08236 651 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ALOX5P09917 674 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CCNYL3P0C7X3 344 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HNRNPCL4P0DMR1 293 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 NR2F1P10589 423 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CEACAM1P13688 526 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ETS2P15036 469 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TNNI3P19429 210 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 PTGER1P34995 402 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 GCKP35557 465 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SOX11P35716 441 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 MAP3K8P41279 467 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CASP9P55211 416 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SELENOWP63302 87 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ZNF267Q14586 743 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 NSDHLQ15738 373 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ARHGAP11BQ3KRB8 267 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 LRRC23Q53EV4 343 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HES3Q5TGS1 186 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 AP1ARQ63HQ0 302 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HEPHL1Q6MZM0 1159 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 DHRS13Q6UX07 377 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 FKBP9P1Q75LS8 142 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 C16orf62Q7Z3J2 963 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SLCO6A1Q86UG4 719 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 KRT73Q86Y46 540 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM151BQ8IW70 566 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ADGRG5Q8IZF4 528 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 MORN4Q8NDC4 146 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 DEFB124Q8NES8 71 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 OR5D16Q8NGK9 328 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 BBS10Q8TAM1 723 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 XAGE5Q8WWM1 108 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 METTL21AQ8WXB1 218 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 LZICQ8WZA0 190 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 DAZLQ92904 295 aaKnown RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 RAB8BQ92930 207 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 SLCO4A1Q96BD0 722 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms