RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DIO2Q92813 273 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 GFM2Q969S9 779 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 PKNOX2Q96KN3 472 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ZIM3Q96PE6 472 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF395Q9H8N7 513 aaPredicted RBP10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 C1orf109Q9NX04 203 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 EHD3Q9NZN3 535 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 CNIH4Q9P003 139 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 SUCOQ9UBS9 1254 aaKnown RBP10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 TRAF6Q9Y4K3 522 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 LRBAP50851 2863 aa10.7□□□□□ -0.7
RABGGTA-216ENST00000560243 ADGRG4Q8IZF6 3080 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 MYO1GB0I1T2 1018 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 NPIPB8E9PQR5 432 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ACOT7O00154 380 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC28A1O00337 649 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 PRRG2O14669 202 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 PIP5K1BO14986 540 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RGS16O15492 202 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RGS14O43566 566 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 JUNP05412 331 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 TPOP07202 933 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ABCB1P08183 1280 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 FGF4P08620 206 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ESRRAP11474 423 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 SDC1P18827 310 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 GRNP28799 593 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DCTP40126 519 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 CORO7P57737 925 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 MPP2Q14168 576 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RFTN2Q52LD8 501 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 SH2D4BQ5SQS7 431 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ARHGAP11AQ6P4F7 1023 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RGS9BPQ6ZS82 235 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 TRILQ7L0X0 811 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DDIASQ8IXT1 998 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DND1Q8IYX4 353 aaKnown RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 FAM109AQ8N4B1 249 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RPRMLQ8N4K4 120 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 CLHC1Q8NHS4 586 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 SPPL2AQ8TCT8 520 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 TWIST2Q8WVJ9 160 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 OMA1Q96E52 524 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 LCORQ96JN0 433 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 FCRL1Q96LA6 429 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 JSRP1Q96MG2 331 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 RILPQ96NA2 401 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 BBS4Q96RK4 519 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DMRTA2Q96SC8 542 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DOHHQ9BU89 302 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 CENPHQ9H3R5 247 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF703Q9H7S9 590 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 MIEF1Q9NQG6 463 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 GIMAP4Q9NUV9 329 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ZDHHC2Q9UIJ5 367 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 ENTPD4Q9Y227 616 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 GPR55Q9Y2T6 319 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 PKDREJQ9NTG1 2253 aa10.69□□□□□ -0.7
RABGGTA-216ENST00000560243 DCHS2Q6V1P9 2916 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 WDR91A4D1P6 747 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CAPN14A8MX76 684 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NPIPA2E9PIF3 369 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NPIPA3F8WFD2 350 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TP53I11O14683 189 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 LSM1O15116 133 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 AKAP10O43572 662 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 ITM2AO43736 263 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TRIM3O75382 744 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 LYPLA1O75608 230 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 PPM1BO75688 479 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 IGHG3P01860 377 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CT45A8P0DMV1 189 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CT45A9P0DMV2 189 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 ENDOUP21128 410 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 DRD5P21918 477 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 MPIP34949 423 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 MC3RP41968 323 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CASP3P42574 277 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 PPICP45877 212 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 GSTM5P46439 218 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 SERPINB4P48594 390 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NCBP2P52298 156 aaKnown RBP eCLIP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NRG3P56975 720 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 RPL38P63173 70 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 GALNTL6Q49A17 601 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF385BQ569K4 471 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CT45A2Q5DJT8 189 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TNFAIP8L3Q5GJ75 292 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 FNDC7Q5VTL7 733 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TMEM107Q6UX40 140 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NPSR1Q6W5P4 371 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 RNF165Q6ZSG1 346 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 SAMD14Q8IZD0 417 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 FAM9CQ8IZT9 166 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CLYBLQ8N0X4 340 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 MARVELD2Q8N4S9 558 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms