RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 NME6O75414 186 aaPredicted RBP20.06■□□□□ 0.8
SNX1-206ENST00000559389 NADKO95544 446 aaPredicted RBP20.06■□□□□ 0.8
SNX1-206ENST00000559389 WDPCPO95876 746 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 SOAT1P35610 550 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 CD97P48960 835 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 KCNK10P57789 538 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 PRR5P85299 388 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 ZNF155Q12901 538 aaPredicted RBP20.06■□□□□ 0.8
SNX1-206ENST00000559389 AGKQ53H12 422 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 HLA-DQA1Q5Y7H0 255 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 SZRD1Q7Z422 152 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 LSM14AQ8ND56 463 aaKnown RBP20.06■□□□□ 0.8
SNX1-206ENST00000559389 SLC22A8Q8TCC7 542 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 BTBD9Q96Q07 612 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 SLC25A18Q9H1K4 315 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 SERHLQ9NQF3 203 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 ZNF71Q9NQZ8 489 aaPredicted RBP20.06■□□□□ 0.8
SNX1-206ENST00000559389 SAR1AQ9NR31 198 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 PCDHGB4Q9UN71 923 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 ERVK-11Q9UQG0 969 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 SNX8Q9Y5X2 465 aa20.06■□□□□ 0.8
SNX1-206ENST00000559389 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 OR5H15A6NDH6 313 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 ZNF354AO60765 605 aaPredicted RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 CD1EP15812 388 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 CAPN3P20807 821 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 TRHRP34981 398 aaPredicted RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 SSR4P51571 173 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 DCAF7P61962 342 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 GAB1Q13480 694 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 PIGGQ5H8A4 983 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 NUP43Q8NFH3 380 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 OR56A1Q8NGH5 318 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 GOT1L1Q8NHS2 421 aaPredicted RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 HOXB13Q92826 284 aaPredicted RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 VPS33AQ96AX1 596 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 MOAP1Q96BY2 351 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 SPDL1Q96EA4 605 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 GIMAP5Q96F15 307 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 INPP5KQ9BT40 448 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 NMUR2Q9GZQ4 415 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 NXF5Q9H1B4 397 aaKnown RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 SLC52A3Q9NQ40 469 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 RYDENQ9NUL5 291 aaKnown RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 PLA2G3Q9NZ20 509 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 CSAG2Q9Y5P2 127 aa20.05■□□□□ 0.8
SNX1-206ENST00000559389 DSPP15924 2871 aaKnown RBP20.05■□□□□ 0.8
SNX1-206ENST00000559389 ITPR1Q14643 2758 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 RNF103-CHMP3A0A140T963 221 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 DYTNA2CJ06 578 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 ASPDHA6ND91 283 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 FRG2CA6NGY1 282 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 CCDC154A6NI56 674 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 DPM1O60762 260 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 ERN1O75460 977 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 CASRP41180 1078 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 PPICP45877 212 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 CCT3P49368 545 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 NR0B1P51843 470 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 ARG2P78540 354 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 TUBA3CQ13748 450 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 UBAP2LQ14157 1087 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 NNATQ16517 81 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 SPDYE7PQ495Y7 208 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 ZNF468Q5VIY5 522 aaPredicted RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 MFSD12Q6NUT3 480 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 TUBA3EQ6PEY2 450 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 LYPD8Q6UX82 237 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 NPSR1Q6W5P4 371 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 GK5Q6ZS86 529 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 ZADH2Q8N4Q0 377 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 SLC15A4Q8N697 577 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 RBMXL3Q8N7X1 1067 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 OR5AK3PQ8NH89 298 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 HAS2Q92819 552 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 LCORQ96JN0 433 aaPredicted RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 PANX1Q96RD7 426 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 UTP23Q9BRU9 249 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 LMF2Q9BU23 707 aaKnown RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 RMND5AQ9H871 391 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 TRIM45Q9H8W5 580 aaPredicted RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 EQTNQ9NQ60 294 aa20.04■□□□□ 0.8
SNX1-206ENST00000559389 GPR55Q9Y2T6 319 aaPredicted RBP20.04■□□□□ 0.8
SNX1-206ENST00000559389 CPSF4O95639 269 aaKnown RBP20.03■□□□□ 0.8
SNX1-206ENST00000559389 F10P00742 488 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 DRD5P21918 477 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 SOX3P41225 446 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 CDKN2CP42773 168 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 ST13P50502 369 aaKnown RBP20.03■□□□□ 0.8
SNX1-206ENST00000559389 HLCSP50747 726 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 PRKAG1P54619 331 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 CORO7P57737 925 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 PSG6Q00889 435 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 EXOSC6Q5RKV6 272 aaKnown RBP20.03■□□□□ 0.8
SNX1-206ENST00000559389 DNAJC14Q6Y2X3 702 aaPredicted RBP20.03■□□□□ 0.8
SNX1-206ENST00000559389 PIGWQ7Z7B1 504 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 GPALPP1Q8IXQ4 340 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 ASB15Q8WXK1 588 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 ANKRD10Q9NXR5 420 aa20.03■□□□□ 0.8
SNX1-206ENST00000559389 TTC36A6NLP5 189 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms