RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TERF2Q15554 542 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ADPRMQ3LIE5 342 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 TMEM35AQ53FP2 167 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CMPK2Q5EBM0 449 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 SGO1Q5FBB7 561 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 UBAP2Q5T6F2 1119 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 PRAMEF20Q5VT98 475 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 KHDRBS2Q5VWX1 349 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 C18orf63Q68DL7 685 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 KLC3Q6P597 504 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 MEX3BQ6ZN04 569 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 Q6ZPB1 254 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 FAM47EQ6ZV65 393 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ISCA2Q86U28 154 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 RPRMLQ8N4K4 120 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 POGLUT1Q8NBL1 392 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 SRFBP1Q8NEF9 429 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 OR2M7Q8NG81 312 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 OR7G3Q8NG95 312 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 OR10Q1Q8NGQ4 319 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 OR14A16Q8NHC5 309 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 HUS1BQ8NHY5 278 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 UHMK1Q8TAS1 419 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 SLC2A12Q8TD20 617 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 PTPMT1Q8WUK0 201 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 DAZLQ92904 295 aaKnown RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 UBE2E3Q969T4 207 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ATP6V1E2Q96A05 226 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 UBXN10Q96LJ8 280 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 C16orf45Q96MC5 204 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 RASL10BQ96S79 203 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ATOH8Q96SQ7 321 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CENPKQ9BS16 269 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 TBCDQ9BTW9 1192 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ROGDIQ9GZN7 287 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 PITHD1Q9GZP4 211 aaPredicted RBP6.77□□□□□ -1.33
SPG11-213ENST00000558988 LYRM4Q9HD34 91 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 SNX15Q9NRS6 342 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 ALKBH4Q9NXW9 302 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 COQ3Q9NZJ6 369 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CLDN16Q9Y5I7 305 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 CACNA1CQ13936 2221 aa6.77□□□□□ -1.33
SPG11-213ENST00000558988 A0A096LPK6 155 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TMEM200CA6NKL6 621 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 SYCE1LA8MT33 242 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 C22orf46C9J442 243 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 E9PLN8 166 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 PLPP1O14494 284 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 EEDO75530 441 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 SIX3O95343 332 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 ACSL3O95573 720 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 C1QAP02745 245 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 P04436 131 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 C2P06681 752 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CCL3P10147 92 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TYK2P29597 1187 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TLX1P31314 330 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 PIGAP37287 484 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 MAGEA5P43359 124 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 NEK2P51955 445 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 HNRNPH2P55795 449 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 C21orf58P58505 322 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 RPS13P62277 151 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 HERVK_113P63132 956 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ERVK-8P63133 956 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 KCNJ2P63252 427 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 PHEXP78562 749 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 PLIN5Q00G26 463 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 FOLH1Q04609 750 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CKAP4Q07065 602 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 PMPCAQ10713 525 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ILF2Q12905 390 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 TBCCQ15814 346 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 FAM83EQ2M2I3 478 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CDKL4Q5MAI5 379 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 FAM219BQ5XKK7 198 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TTC19Q6DKK2 380 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 OR4C11Q6IEV9 310 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 GRHL2Q6ISB3 625 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ARHGAP11AQ6P4F7 1023 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CYP20A1Q6UW02 462 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TMEM64Q6YI46 380 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 DGAT2L6Q6ZPD8 337 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 RTL4Q6ZR62 310 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 GOLGA7Q7Z5G4 137 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 GPR180Q86V85 440 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CCDC71Q8IV32 467 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 CHERPQ8IWX8 916 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 LAS2Q8IYD9 372 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CENPLQ8N0S6 344 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 EID3Q8N140 333 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 MARVELD2Q8N4S9 558 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 MORN4Q8NDC4 146 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 UBTD2Q8WUN7 234 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CHTF18Q8WVB6 975 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 IFT81Q8WYA0 676 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 RGMAQ96B86 450 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ANKRD9Q96BM1 317 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms