RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 RIPK2O43353 540 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 PPM1BO75688 479 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 OTCP00480 354 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 CAPN3P20807 821 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 BMP5P22003 454 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 DNAJA1P31689 397 aaKnown RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 FOXA1P55317 472 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 CORO7P57737 925 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 MYBPHQ13203 477 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 TMEM198Q66K66 360 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 VASNQ6EMK4 673 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 ANGPTL8Q6UXH0 198 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 LIX1Q8N485 282 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 C7orf57Q8NEG2 295 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 C17orf47Q8NEP4 570 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 MYRIPQ8NFW9 859 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 OR7G1Q8NGA0 311 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 KAT2AQ92830 837 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 TMEM41AQ96HV5 264 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 GPATCH1Q9BRR8 931 aaKnown RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 G6PC3Q9BUM1 346 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 EBPLQ9BY08 206 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 C12orf65Q9H3J6 166 aaKnown RBP12.36□□□□□ -0.43
VPS18-203ENST00000558855 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 BRF2Q9HAW0 419 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 CRIM1Q9NZV1 1036 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 KCNN3Q9UGI6 736 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 MAPRE3Q9UPY8 281 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 TIMM22Q9Y584 194 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 ZFHX3Q15911 3703 aa12.36□□□□□ -0.43
VPS18-203ENST00000558855 TP53I11O14683 189 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SNPHO15079 494 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ICOSLGO75144 302 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SUPT7LO94864 414 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 EPPINO95925 133 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ABHD2P08910 425 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 GABRA1P14867 456 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 TBCELQ5QJ74 424 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 TIGD3Q6B0B8 471 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ARSKQ6UWY0 536 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SPNS3Q6ZMD2 512 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 TIFABQ6ZNK6 161 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 TAOK1Q7L7X3 1001 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 CCDC116Q8IYX3 515 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 WDSUB1Q8N9V3 476 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 C9orf106Q8NAJ2 232 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 OR9A2Q8NGT5 310 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 TMBIM1Q969X1 311 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ZNF382Q96SR6 550 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 OSBPL11Q9BXB4 747 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SERHLQ9NQF3 203 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 SNX6Q9UNH7 406 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
VPS18-203ENST00000558855 CAMK2AQ9UQM7 478 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 DLGAP4Q9Y2H0 992 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ITPR3Q14573 2671 aa12.35□□□□□ -0.43
VPS18-203ENST00000558855 ANKHD1Q8IWZ3 2542 aaKnown RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 A0A1W2PPM1 405 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 PCDH7O60245 1069 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 CTAG2O75638 210 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 CT45A8P0DMV1 189 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 CT45A9P0DMV2 189 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 CSNK2A2P19784 350 aaPredicted RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 MASP1P48740 699 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 IST1P53990 364 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 PLCXD2Q0VAA5 305 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 FOXF2Q12947 444 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 TOMM20Q15388 145 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 CT45A2Q5DJT8 189 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 NHSL2Q5HYW2 709 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 GPRIN3Q6ZVF9 776 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 OR7G2Q8NG99 324 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 OR4N2Q8NGD1 307 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 RDH11Q8TC12 318 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 C16orf78Q8WTQ4 265 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 EXOSC8Q96B26 276 aaKnown RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 LCORQ96JN0 433 aaPredicted RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 TRIB1Q96RU8 372 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 SECISBP2Q96T21 854 aaKnown RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 RTN4RQ9BZR6 473 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 METTL7AQ9H8H3 244 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 AHSPQ9NZD4 102 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 FLRT3Q9NZU0 649 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 VPS29Q9UBQ0 182 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 B4GALT7Q9UBV7 327 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 FBXL2Q9UKC9 423 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 GPR55Q9Y2T6 319 aaPredicted RBP12.34□□□□□ -0.43
VPS18-203ENST00000558855 PCDHGB3Q9Y5G1 929 aa12.34□□□□□ -0.43
VPS18-203ENST00000558855 MAP1AP78559 2803 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms