RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PCGF3Q3KNV8 242 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 C9orf135Q5VTT2 229 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 PXKQ7Z7A4 578 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 MRPL41Q8IXM3 137 aaKnown RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 VWA5B2Q8N398 1253 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 ABHD11Q8NFV4 315 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 WFIKKN2Q8TEU8 576 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 MYRFLQ96LU7 910 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 H3BMQ9 156 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SHOXO15266 292 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 KDELR3O43731 214 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 ARRB1P49407 418 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 GALEQ14376 348 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 TMPPEQ6ZT21 453 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 LILRB2Q8N423 598 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 OR56A1Q8NGH5 318 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SGCZQ96LD1 299 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 COG8Q96MW5 612 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SMOQ99835 787 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 FER1L4A9Z1Z3 1794 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SERPINA7P05543 415 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 C10orf62Q5T681 223 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 RNF111Q6ZNA4 994 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 GTF2H4Q92759 462 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 NEDD4LQ96PU5 975 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 F2RL3Q96RI0 385 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 NFS1Q9Y697 457 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 FAM189A1O60320 539 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 LILRB5O75023 590 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SLC22A5O76082 557 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 SCGB1D1O95968 90 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 ZNF791Q3KP31 576 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 WDR53Q7Z5U6 358 aaPredicted RBP13.31□□□□□ -0.28
SPG11-210ENST00000558319 CILP2Q8IUL8 1156 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 FRS2Q8WU20 508 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 HHIPQ96QV1 700 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 DOHHQ9BU89 302 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 TCHHQ07283 1943 aa13.31□□□□□ -0.28
SPG11-210ENST00000558319 FRMPD1Q5SYB0 1578 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 UCHL1P09936 223 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 SLC2A5P22732 501 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 FOXK1P85037 733 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 APOFQ13790 326 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 TRAM1Q15629 374 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 SLC29A3Q9BZD2 475 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 IQGAP1P46940 1657 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 INAVAQ3KP66 663 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 RPS26P11Q5JNZ5 115 aaPredicted RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ZNF619Q8N2I2 560 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 OR51L1Q8NGJ5 315 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 SEZ6LQ9BYH1 1024 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 GLS2Q9UI32 602 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 FAM221BA6H8Z2 402 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 SC5DO75845 299 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 NPPAP01160 153 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 DCNP07585 359 aaKnown RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 OXTRP30559 389 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 SOX3P41225 446 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 HLCSP50747 726 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 BCL2A1Q16548 175 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 HAS2Q92819 552 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 FAM46AQ96IP4 442 aaKnown RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 USB1Q9BQ65 265 aaKnown RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 STRADBQ9C0K7 418 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 EBLN1P0CF75 366 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 OR4D2P58180 307 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 PDSS1Q5T2R2 415 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 FAM205BPQ63HN1 556 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 TLDC1Q6P9B6 456 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 GIMAP5Q96F15 307 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 VSTM5A8MXK1 200 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 E9PI62 339 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 LYPLA2O95372 231 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 TXNDC12O95881 172 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 PTTG1O95997 202 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 ASGR2P07307 311 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 PBX2P40425 430 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 POU6F2P78424 691 aaPredicted RBP13.3□□□□□ -0.28
SPG11-210ENST00000558319 DEFA6Q01524 100 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 CES4AQ5XG92 561 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPG11-210ENST00000558319 APCDD1Q8J025 514 aa13.3□□□□□ -0.28
SPG11-210ENST00000558319 NUP43Q8NFH3 380 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms