RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CCDC36Q8IYA8 594 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CENPSQ8N2Z9 138 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RAB42Q8N4Z0 105 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 DRAXINQ8NBI3 349 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ICA1LQ8NDH6 482 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CHDHQ8NE62 594 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 NFAM1Q8NET5 270 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR9Q2Q8NGE9 314 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR5T2Q8NGG2 359 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR8J1Q8NGP2 316 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR6S1Q8NH40 331 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RAET1EQ8TD07 263 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 FBXO32Q969P5 355 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RHOXF2Q9BQY4 288 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PITPNM3Q9BZ71 974 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 DHX33Q9H6R0 707 aaKnown RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 KCNK13Q9HB14 408 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PLEKHA3Q9HB20 300 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF71Q9NQZ8 489 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 GPR83Q9NYM4 423 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 KLHL8Q9P2G9 620 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RNF14Q9UBS8 474 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PTBP2Q9UKA9 531 aaKnown RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF346Q9UL40 294 aaKnown RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR10H1Q9Y4A9 318 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 LRP12Q9Y561 859 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 TMEM94Q12767 1356 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 MYO15BQ96JP2 1530 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 IGHV4-4A0A075B6R2 117 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 A0A0G2JLW4 131 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 TTC26A0AVF1 554 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 XKRY2A2RUG3 117 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 MBLAC1A4D2B0 266 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CTAGE15A4D2H0 777 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 LRRIQ4A6NIV6 560 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CLDN5O00501 218 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 POLR3GO15318 223 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF208O43345 1280 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR1F1O43749 312 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 FGF17O60258 216 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 BMP15O95972 392 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 FHP07954 510 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CD48P09326 243 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 SLC35G4P0C7Q5 338 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ERVK-10P10266 1014 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 RDXP35241 583 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 PEX3P56589 373 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 NOP14P78316 857 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 MRPS6P82932 125 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 POU3F1Q03052 451 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 GBE1Q04446 702 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ARL16Q0P5N6 197 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 RIGQ13278 110 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 GCKRQ14397 625 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 MTF1Q14872 753 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 MAPK6Q16659 721 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 HAGHQ16775 308 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 IMMTQ16891 758 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CFAP221Q4G0U5 840 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 FFAR4Q5NUL3 377 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 TAF3Q5VWG9 929 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF324BQ6AW86 544 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 SLC35E4Q6ICL7 350 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 PNCKQ6P2M8 343 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 Q7L0L9 218 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CHMP1BQ7LBR1 199 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 DPY19L4Q7Z388 723 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CTAGE6Q86UF2 777 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 RANBP3LQ86VV4 465 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 UBQLNLQ8IYU4 475 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 GVQW1Q8N7I0 195 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR4F17Q8NGA8 305 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR5AU1Q8NGC0 362 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR10V1Q8NGI7 309 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR6F1Q8NGZ6 308 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR4F5Q8NH21 305 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 MAPK15Q8TD08 544 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 RPL3LQ92901 407 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 PNPLA2Q96AD5 504 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 DHTKD1Q96HY7 919 aaPredicted RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 CAPNS2Q96L46 248 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 TCEANC2Q96MN5 208 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OR4F4Q96R69 305 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 OVOL2Q9BRP0 275 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 FUCA2Q9BTY2 467 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 APOOQ9BUR5 198 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 TBC1D10AQ9BXI6 508 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 PINK1Q9BXM7 581 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ALG9Q9H6U8 611 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ELOVL3Q9HB03 270 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 LPAR2Q9HBW0 351 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 NRN1Q9NPD7 142 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 DDX18Q9NVP1 670 aaKnown RBP2.7□□□□□ -1.98
TRAV28-201ENST00000557548 KLK11Q9UBX7 282 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 TCF19Q9Y242 345 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 AP4B1Q9Y6B7 739 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 RNF215Q9Y6U7 377 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ZHX2Q9Y6X8 837 aa2.7□□□□□ -1.98
TRAV28-201ENST00000557548 ZCCHC6Q5VYS8 1495 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms