RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NR1H2P55055 460 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 AP1S2P56377 157 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 STXBP1P61764 594 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 KCNJ2P63252 427 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SORDQ00796 357 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ASPHQ12797 758 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 KIF5AQ12840 1032 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF791Q3KP31 576 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 HSP90AA5PQ58FG0 334 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 PIGGQ5H8A4 983 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 RBM20Q5T481 1227 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SLC30A6Q6NXT4 461 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 PLBD1Q6P4A8 553 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 OPN5Q6U736 354 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 TMPRSS11BQ86T26 416 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 THOC6Q86W42 341 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 LACC1Q8IV20 430 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 P3H2Q8IVL5 708 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF595Q8IYB9 648 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 KLHDC8AQ8IYD2 350 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 LRRC25Q8N386 305 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 MORN4Q8NDC4 146 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SIMC1Q8NDZ2 872 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 OR8H1Q8NGG4 311 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 OR8K3Q8NH51 312 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 OR14A16Q8NHC5 309 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SLC2A12Q8TD20 617 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 PAQR8Q8TEZ7 354 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ATL1Q8WXF7 558 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 DAZLQ92904 295 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 MS4A6EQ96DS6 147 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SPACA9Q96E40 222 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 FAR2Q96K12 515 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 Q96MF0 132 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 C7orf26Q96N11 449 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 QRFPRQ96P65 431 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 AIF1LQ9BQI0 150 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 WDR83Q9BRX9 315 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 NPLQ9BXD5 320 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 TMPRSS13Q9BYE2 586 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ALOXE3Q9BYJ1 711 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 QRSL1Q9H0R6 528 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 GRPEL1Q9HAV7 217 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ACKR4Q9NPB9 350 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 OBP2BQ9NPH6 170 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 HOMER3Q9NSC5 361 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 IARS2Q9NSE4 1012 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 TAS2R13Q9NYV9 303 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 IKZF3Q9UKT9 509 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 BOKQ9UMX3 212 aaPredicted RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 MRPS33Q9Y291 106 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 NPFFR2Q9Y5X5 522 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 NCKAP5O14513 1909 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 KIAA1549Q9HCM3 1950 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 MAGEB16A2A368 324 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 LRIT2A6NDA9 550 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 C17orf105B2RV13 164 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 CTNSO60931 367 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 LDB3O75112 727 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 ETHE1O95571 254 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 TBX6O95947 436 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 MLNP12872 115 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 MAGEA3P43357 314 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 LIM2P55344 173 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 PPP2R2BQ00005 443 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 ID2Q02363 134 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 CRYZQ08257 329 aaKnown RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 STX4Q12846 297 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 GPS1Q13098 491 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 DUSP8Q13202 625 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 DAG1Q14118 895 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 EFTUD2Q15029 972 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 PPP1R3AQ16821 1122 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 ZBTB37Q5TC79 503 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 SLC22A10Q63ZE4 541 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 NSUN5P2Q63ZY6 315 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 SBSNQ6UWP8 590 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 KRT74Q7RTS7 529 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 TMEM139Q8IV31 216 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 C9orf40Q8IXQ3 194 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 LIX1Q8N485 282 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 C2CD4AQ8NCU7 369 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 OR10G3Q8NGC4 313 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 OR5L2Q8NGL0 311 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 CALML6Q8TD86 181 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF721Q8TF20 911 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 HTRA1Q92743 480 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 MUL1Q969V5 352 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF566Q969W8 418 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 WDR89Q96FK6 387 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 JSRP1Q96MG2 331 aaPredicted RBP5.35□□□□□ -1.55
VPS33B-207ENST00000557470 RUNDC3BQ96NL0 473 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 SERPINB12Q96P63 405 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 TIMP4Q99727 224 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 TRIM54Q9BYV2 358 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
VPS33B-207ENST00000557470 GPATCH2Q9NW75 528 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms