RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CNSTQ6PJW8 725 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 OLFM4Q6UX06 510 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MFSD7Q6UXD7 560 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 WDR88Q6ZMY6 472 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ASRGL1Q7L266 308 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 TAF8Q7Z7C8 310 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 AMZ2Q86W34 360 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 LRRC49Q8IUZ0 686 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 SAMD12Q8N8I0 201 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MINDY2Q8NBR6 621 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ICA1LQ8NDH6 482 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 FBXO25Q8TCJ0 367 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MRAPQ8TCY5 172 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 TMEM45BQ96B21 275 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 CCDC51Q96ER9 411 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 C16orf58Q96GQ5 468 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ANKRD27Q96NW4 1050 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 CPXM1Q96SM3 734 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 TTYH2Q9BSA4 534 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ABCG4Q9H172 646 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 DCTPP1Q9H773 170 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 PDFQ9HBH1 243 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 HPS4Q9NQG7 708 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 HOMER3Q9NSC5 361 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 NDUFA13Q9P0J0 144 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ERVK-18Q9QC07 812 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 SPASTQ9UBP0 616 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 COPS7AQ9UBW8 275 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MIOXQ9UGB7 285 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 MLXQ9UH92 298 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ENTPD4Q9Y227 616 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 PIN4Q9Y237 131 aaKnown RBP2.25□□□□□ -2.05
SCFD1-218ENST00000556256 PLEKHA6Q9Y2H5 1048 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 FBXO7Q9Y3I1 522 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF175Q9Y473 711 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 AUP1Q9Y679 476 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 GON4LQ3T8J9 2241 aa2.25□□□□□ -2.05
SCFD1-218ENST00000556256 RNF103-CHMP3A0A140T963 221 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 TEX48A0A1B0GUV7 120 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 TRIM49BA6NDI0 452 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ARHGAP42A6NI28 874 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ADAM12O43184 909 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 BUB1O43683 1085 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ZCCHC18P0CG32 403 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 GAP43P17677 238 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 SPRP35270 261 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 RABIFP47224 123 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 KRTAP10-10P60014 251 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 IL1RL1Q01638 556 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 NAAAQ02083 359 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 CYLC2Q14093 348 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 SHROOM1Q2M3G4 852 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF699Q32M78 642 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ACSF3Q4G176 576 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF506Q5JVG8 444 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 AGAP7PQ5VUJ5 663 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 OR6B2Q6IFH4 312 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ARMCX5Q6P1M9 558 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 REG3GQ6UW15 175 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ATRAIDQ6UW56 229 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 MOB2Q70IA6 237 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 TMUB2Q71RG4 321 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 KDM8Q8N371 416 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 LRRC17Q8N6Y2 441 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 RNF148Q8N7C7 305 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 CNNM3Q8NE01 707 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 ZNF397Q8NF99 534 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 OR4Q3Q8NH05 313 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 TMEM37Q8WXS4 190 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 SAMD8Q96LT4 415 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 NSMCE2Q96MF7 247 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 DEFB118Q96PH6 123 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 SDHCQ99643 169 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 NLNQ9BYT8 704 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 LRRCC1Q9C099 1032 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 FAM124BQ9H5Z6 455 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 IL1RL2Q9HB29 575 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 CNOT2Q9NZN8 540 aaKnown RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 CIDEBQ9UHD4 219 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 EMCNQ9ULC0 261 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 MGAT4AQ9UM21 535 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 MRPL11Q9Y3B7 192 aaKnown RBP2.24□□□□□ -2.05
SCFD1-218ENST00000556256 CPQQ9Y646 472 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 SYNJ2O15056 1496 aa2.24□□□□□ -2.05
SCFD1-218ENST00000556256 AFF2P51816 1311 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 A0A1W2PQ72 361 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 PDLIM1O00151 329 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 STK17BO94768 372 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 TOXO94900 526 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 VENTXO95231 258 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 FCGR3AP08637 254 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 ETS1P14921 441 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 CYP11B1P15538 503 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 GNSP15586 552 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 UCP1P25874 307 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 PRDX6P30041 224 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 MAGEA4P43358 317 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 SGSHP51688 502 aa2.23□□□□□ -2.05
SCFD1-218ENST00000556256 BPIFB3P59826 476 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms