RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 DNM1P46Q6ZS02 220 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 KIAA1328Q86T90 577 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 CTAGE6Q86UF2 777 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 GCNT2Q8N0V5 402 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ANKRD53Q8N9V6 530 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF721Q8TF20 911 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 UCN3Q969E3 161 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ZBTB8AQ96BR9 441 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 STARD4Q96DR4 205 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ZC3HAV1LQ96H79 300 aaKnown RBP6.2□□□□□ -1.42
ATXN3-236ENST00000556220 SENP5Q96HI0 755 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF597Q96LX8 424 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 RUNDC3BQ96NL0 473 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 GNRHR2Q96P88 292 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 FAM111AQ96PZ2 611 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 TUBA1CQ9BQE3 449 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 SPNS1Q9H2V7 528 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 PARVBQ9HBI1 364 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 HOMER3Q9NSC5 361 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 ELOVL5Q9NYP7 299 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 FETUBQ9UGM5 382 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-236ENST00000556220 LAMP3Q9UQV4 416 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 PDE10AQ9Y233 779 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 MRPS33Q9Y291 106 aaKnown RBP6.2□□□□□ -1.42
ATXN3-236ENST00000556220 MED16Q9Y2X0 877 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 DHRS7Q9Y394 339 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 EMC9Q9Y3B6 208 aa6.2□□□□□ -1.42
ATXN3-236ENST00000556220 V9GYY5 206 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-236ENST00000556220 PRKDCP78527 4128 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 A0A1W2PNV4 684 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 FRG2CA6NGY1 282 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 E7EVH7 732 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 HS3ST1O14792 307 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 KLF4O43474 513 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SNX4O95219 450 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 LRATO95237 230 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 ETHE1O95571 254 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 ACTL6AO96019 429 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 PLAUP00749 431 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 NAT2P11245 290 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 POU2F1P14859 743 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 OGNP20774 298 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CHMP24386 653 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 STIP1P31948 543 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CCKARP32238 428 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CXCR5P32302 372 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 ACVR1BP36896 505 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CETN2P41208 172 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SESN2P58004 480 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 STXBP1P61764 594 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CRADDP78560 199 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CTBP1Q13363 440 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SERTAD2Q14140 314 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CSHL1Q14406 222 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 EFTUD2Q15029 972 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 NTRK2Q16620 822 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 TOR1AIP1Q5JTV8 583 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 UBAP2Q5T6F2 1119 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 FNDC7Q5VTL7 733 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 LIPNQ5VXI9 398 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 C11orf63Q6NUN7 778 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 VHLLQ6RSH7 139 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SCIMPQ6UWF3 145 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CES3Q6UWW8 571 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CENPUQ71F23 418 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 ZNF550Q7Z398 422 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 PIWIL4Q7Z3Z4 852 aaKnown RBP6.19□□□□□ -1.42
ATXN3-236ENST00000556220 C9orf40Q8IXQ3 194 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 GPATCH11Q8N954 259 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 FAM47BQ8NA70 645 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SLC35B2Q8TB61 432 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SLC5A11Q8WWX8 675 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 KCNJ9Q92806 393 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 DIO2Q92813 273 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 MFSD3Q96ES6 412 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 FAR2Q96K12 515 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 OR4K3Q96R72 315 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SLC39A3Q9BRY0 314 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 KIFC1Q9BW19 673 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SHARPINQ9H0F6 387 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 SLCO5A1Q9H2Y9 848 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 COPS7AQ9UBW8 275 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 MAPRE3Q9UPY8 281 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 C15orf41Q9Y2V0 281 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 CR1P17927 2039 aa6.19□□□□□ -1.42
ATXN3-236ENST00000556220 A0A0G2JN53 185 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 GOLGA6L9A6NEM1 432 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TP53I11O14683 189 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 TP73O15350 636 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 B3GALT2O43825 422 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 IGKV3-11P04433 115 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 CRHP06850 196 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 APRTP07741 180 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 EGR1P18146 543 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 SRD5A1P18405 259 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 SAT1P21673 171 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 MSH2P43246 934 aa6.18□□□□□ -1.42
ATXN3-236ENST00000556220 SLC6A12P48065 614 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms