RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ANGPTL2Q9UKU9 493 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 LIPT1Q9Y234 373 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF451Q9Y4E5 1061 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-220ENST00000555634 GMEB1Q9Y692 573 aa10.44□□□□□ -0.74
SHMT2-220ENST00000555634 BAHCC1Q9P281 2608 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TRBV5-3A0A0A0MS03 114 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 IGHV1-45A0A0A0MS14 117 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 LOC101059948A0A1B0GTJ6 334 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 C2orf92A0A1B0GVN3 265 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 OR2W5A6NFC9 320 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 ZNF891A8MT65 544 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 H0YHG0 523 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TGFBR3LH3BV60 316 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 IFNA14P01570 189 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 UMODP07911 640 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 LIFP15018 202 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 ATP6V1C1P21283 382 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 ME2P23368 584 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 PTGER1P34995 402 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 CPOXP36551 454 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TMED10P49755 219 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 CRISP3P54108 245 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 SLC26A5P58743 744 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 RPS18P62269 152 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 MRPS22P82650 360 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 LIPEQ05469 1076 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 DUSP2Q05923 314 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 RBBP4Q09028 425 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 FUT7Q11130 342 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 EXOSC7Q15024 291 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 RGNQ15493 299 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 PRSS53Q2L4Q9 553 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 GTDC1Q4AE62 458 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 RABL3Q5HYI8 236 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 MFSD12Q6NUT3 480 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 CDC73Q6P1J9 531 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TNFAIP8L2Q6P589 184 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 MRGPREQ86SM8 312 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 DTX1Q86Y01 620 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 C10orf67Q8IYJ2 551 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 ULK2Q8IYT8 1036 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TAGAPQ8N103 731 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 FBXW8Q8N3Y1 598 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 METTL25Q8N6Q8 603 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 OR10A6Q8NH74 314 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 SLC22A8Q8TCC7 542 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 GPR151Q8TDV0 419 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 PTPMT1Q8WUK0 201 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 THAP4Q8WY91 577 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TMEM125Q96AQ2 219 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 CTHRC1Q96CG8 243 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 SENP5Q96HI0 755 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 STACQ99469 402 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 GPATCH1Q9BRR8 931 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 G6PC3Q9BUM1 346 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 OR51I1Q9H343 314 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 CCDC86Q9H6F5 360 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 KAT8Q9H7Z6 458 aaKnown RBP10.43□□□□□ -0.74
SHMT2-220ENST00000555634 FOLH1BQ9HBA9 442 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 DUSP22Q9NRW4 184 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 GIN1Q9NXP7 522 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 NTMQ9P121 344 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 ABI3Q9P2A4 366 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TMEM181Q9P2C4 612 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TEKT2Q9UIF3 430 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 FBXL4Q9UKA2 621 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 HS3ST3B1Q9Y662 390 aa10.43□□□□□ -0.74
SHMT2-220ENST00000555634 TRBV11-1A0A0K0K1C0 115 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 A0A1W2PS29 197 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 ELOVL7A1L3X0 281 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 NME4O00746 187 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 ACOX3O15254 700 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SLC28A2O43868 658 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 HS6ST1O60243 411 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 CNOT3O75175 753 aaKnown RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 ADRB1P08588 477 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 NR2F1P10589 423 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 COX6A1P12074 109 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 HSD17B1P14061 328 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 GPX2P18283 190 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 PTPN6P29350 595 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 IL12BP29460 328 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SSTR4P31391 388 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 RPS26P62854 115 aaKnown RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 MYBPC3Q14896 1274 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 GPAT3Q53EU6 434 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 TRMT12Q53H54 448 aaKnown RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 C1orf146Q5VVC0 180 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 PLAG1Q6DJT9 500 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 C8orf82Q6P1X6 216 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-220ENST00000555634 LRRC69Q6ZNQ3 347 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 KBTBD2Q8IY47 623 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 CLEC4FQ8N1N0 589 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 KIF2BQ8N4N8 673 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 SLC5A8Q8N695 610 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 OR11G2Q8NGC1 345 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 OR8K3Q8NH51 312 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 C16orf52Q8NHV5 167 aa10.42□□□□□ -0.74
SHMT2-220ENST00000555634 FBXO30Q8TB52 745 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms