RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GCAP28676 217 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 UQCRC1P31930 480 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 SOX18P35713 384 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 PEX19P40855 299 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 TRPC1P48995 793 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 MAPK12P53778 367 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 DCAF7P61962 342 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 MGAT2Q10469 447 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 PRICKLE4Q2TBC4 344 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 GLE1Q53GS7 698 aaKnown RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 TBCELQ5QJ74 424 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 FNDC7Q5VTL7 733 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 SHEQ5VZ18 495 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 SLC48A1Q6P1K1 146 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 WDR53Q7Z5U6 358 aaPredicted RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 CTAGE4Q8IX94 777 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 PRR22Q8IZ63 422 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 NAXEQ8NCW5 288 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 MNS1Q8NEH6 495 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 NEIL3Q8TAT5 605 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 SELENOMQ8WWX9 145 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 ZNF597Q96LX8 424 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 RILPQ96NA2 401 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 HBEGFQ99075 208 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 NXF5Q9H1B4 397 aaKnown RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 BRF2Q9HAW0 419 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 BEX4Q9NWD9 120 aaPredicted RBP9.89□□□□□ -0.83
TDP1-212ENST00000555565 SNX6Q9UNH7 406 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 DTX4Q9Y2E6 619 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 PCDHA9Q9Y5H5 950 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 HIVEP2P31629 2446 aa9.89□□□□□ -0.83
TDP1-212ENST00000555565 C1orf226A1L170 272 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 CAPN14A8MX76 684 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TP53I11O14683 189 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 GUCY1B2O75343 617 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 ERAL1O75616 437 aaKnown RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 OR4F21O95013 312 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 SNX4O95219 450 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 ATP1B1P05026 303 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 EPXP11678 715 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 GABRA1P14867 456 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 GPX3P22352 226 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 GDF1P27539 372 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 ABCD3P28288 659 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 HSD17B3P37058 310 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 FEN1P39748 380 aaKnown RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 CASP3P42574 277 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TMED10P49755 219 aaKnown RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 DUSP2Q05923 314 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 MAP4K2Q12851 820 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 DUSP8Q13202 625 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TCHHL1Q5QJ38 904 aaPredicted RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 RIPPLY2Q5TAB7 128 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 FAM111BQ6SJ93 734 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TIFABQ6ZNK6 161 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 ULK2Q8IYT8 1036 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 VWA5B2Q8N398 1253 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 C1orf52Q8N6N3 182 aaKnown RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 SIMC1Q8NDZ2 872 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 C17orf47Q8NEP4 570 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 OR7G1Q8NGA0 311 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 SPPL2AQ8TCT8 520 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 NTNG2Q96CW9 530 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 SECISBP2Q96T21 854 aaKnown RBP9.88□□□□□ -0.83
TDP1-212ENST00000555565 ANGPTL4Q9BY76 406 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 MAT2BQ9NZL9 334 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TMEM216Q9P0N5 145 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 B4GALT7Q9UBV7 327 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 TRPS1Q9UHF7 1281 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 ZNF639Q9UID6 485 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 PCDHGB3Q9Y5G1 929 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 DOCK7Q96N67 2140 aa9.88□□□□□ -0.83
TDP1-212ENST00000555565 KIAA1549Q9HCM3 1950 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 EXOC1LA0A1B0GW35 172 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 GOLGA6L10A6NI86 522 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 KDM4EB2RXH2 506 aaPredicted RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 H7C1Q1 480 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 MANBAO00462 879 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 DLX3O60479 287 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 ABCB1P08183 1280 aaPredicted RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 ABHD2P08910 425 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 CHN1P15882 459 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 TACR1P25103 407 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 CDK9P50750 372 aaKnown RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 NRG3P56975 720 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 CLCQ05315 142 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 CRYZQ08257 329 aaKnown RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 EXOSC7Q15024 291 aaKnown RBP9.87□□□□□ -0.83
TDP1-212ENST00000555565 LTB4RQ15722 352 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 NNATQ16517 81 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 UNC50Q53HI1 259 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 ZNF678Q5SXM1 525 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 TEX35Q5T0J7 233 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 C6orf163Q5TEZ5 329 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
TDP1-212ENST00000555565 FAM180BQ6P0A1 224 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms