RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RPL38P63173 70 aaKnown RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 KCNJ2P63252 427 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 HYAL4Q2M3T9 481 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 RFTN2Q52LD8 501 aaPredicted RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 CRYBG3Q68DQ2 2970 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 DESI1Q6ICB0 168 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 C3P1Q6ZMU1 363 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 RGS9BPQ6ZS82 235 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 IKBIPQ70UQ0 350 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 DOLPP1Q86YN1 238 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 FAM9CQ8IZT9 166 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 CLYBLQ8N0X4 340 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 FAM109AQ8N4B1 249 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 OR7G2Q8NG99 324 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 ITLN2Q8WWU7 325 aaPredicted RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 PHF12Q96QT6 1004 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 BBS4Q96RK4 519 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 EML4Q9HC35 981 aaKnown RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 SSU72Q9NP77 194 aaKnown RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 RYDENQ9NUL5 291 aaKnown RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 TAS2R7Q9NYW3 318 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 CNIH4Q9P003 139 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 ZDHHC2Q9UIJ5 367 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 JUNP05412 331 aaKnown RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 PTGS2P35354 604 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 SERPINB5P36952 375 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 TMED10P49755 219 aaKnown RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 ADORA2A-AS1P86434 159 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 MPP2Q14168 576 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 GALNTL6Q49A17 601 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 XKR7Q5GH72 579 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 CD163Q86VB7 1156 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 FAM57AQ8TBR7 257 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 SPPL2AQ8TCT8 520 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 DIO2Q92813 273 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 GFM2Q969S9 779 aaKnown RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 ERP27Q96DN0 273 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 LCORQ96JN0 433 aaPredicted RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 CCT7Q99832 543 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF703Q9H7S9 590 aaPredicted RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 SUCOQ9UBS9 1254 aaKnown RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 PRODH2Q9UF12 536 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 WBP11Q9Y2W2 641 aaKnown RBP18.83■□□□□ 0.6
VTI1B-205ENST00000555543 MEMO1Q9Y316 297 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 HRH3Q9Y5N1 445 aa18.83■□□□□ 0.6
VTI1B-205ENST00000555543 NCKAP5O14513 1909 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 WDR91A4D1P6 747 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 CAPN14A8MX76 684 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ADAM10O14672 748 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 TP53I11O14683 189 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 PLOD3O60568 738 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 LYPLA1O75608 230 aaPredicted RBP18.82■□□□□ 0.6
VTI1B-205ENST00000555543 IGHG3P01860 377 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ABCB1P08183 1280 aaPredicted RBP18.82■□□□□ 0.6
VTI1B-205ENST00000555543 MPIP34949 423 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 PPICP45877 212 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 NCBP2P52298 156 aaKnown RBP eCLIP18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ANKRD26P1Q6NSI1 321 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ARHGAP11AQ6P4F7 1023 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 NUDCD3Q8IVD9 361 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 CLHC1Q8NHS4 586 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 OMA1Q96E52 524 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 C3orf30Q96M34 536 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 VSTM2LQ96N03 204 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 TSSK3Q96PN8 268 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 DOHHQ9BU89 302 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 GLIPR2Q9H4G4 154 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF395Q9H8N7 513 aaPredicted RBP18.82■□□□□ 0.6
VTI1B-205ENST00000555543 ZFP64Q9NPA5 681 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 BOKQ9UMX3 212 aaPredicted RBP18.82■□□□□ 0.6
VTI1B-205ENST00000555543 CELSR2Q9HCU4 2923 aa18.82■□□□□ 0.6
VTI1B-205ENST00000555543 NAV2Q8IVL1 2488 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ATP6AP2A0A1C7CYW4 349 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ANKRD33BA6NCL7 494 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 FRG2CA6NGY1 282 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 PRRG2O14669 202 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ACOX3O15254 700 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ITM2AO43736 263 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 TRIM3O75382 744 aaPredicted RBP18.81■□□□□ 0.6
VTI1B-205ENST00000555543 SKAP2O75563 359 aaPredicted RBP18.81■□□□□ 0.6
VTI1B-205ENST00000555543 PPM1BO75688 479 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ATP6AP2O75787 350 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 TPOP07202 933 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 DHRS4L1P0CG22 281 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 DRD5P21918 477 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 NTSP30990 170 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 MC3RP41968 323 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 CORO7P57737 925 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 PLCXD2Q0VAA5 305 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 ZNF385BQ569K4 471 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 LRIG3Q6UXM1 1119 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 NPSR1Q6W5P4 371 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 HGDQ93099 445 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 HSPBAP1Q96EW2 488 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 PGM2Q96G03 612 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 JSRP1Q96MG2 331 aaPredicted RBP18.81■□□□□ 0.6
VTI1B-205ENST00000555543 RILPQ96NA2 401 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 AMDHD1Q96NU7 426 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 BTBD9Q96Q07 612 aa18.81■□□□□ 0.6
VTI1B-205ENST00000555543 BAIAP2L1Q9UHR4 511 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms