RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CNOT2Q9NZN8 540 aaKnown RBP16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 EIF3FO00303 357 aaPredicted RBP16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLC30A4O14863 429 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 PDPK1O15530 556 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 REM1O75628 298 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 ABLIM3O94929 683 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 LRG1P02750 347 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 CPN2P22792 545 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 AHRP35869 848 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 LIMS1P48059 325 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 MLIPQ5VWP3 458 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 ANKRD53Q8N9V6 530 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 OR56A3Q8NH54 315 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 ECHDC3Q96DC8 303 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 C3orf14Q9HBI5 128 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 A3GALT2U3KPV4 340 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 SCN5AQ14524 2016 aa16.1■□□□□ 0.17
PPP4R3A-208ENST00000555462 A0A075B6Q4 140 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SOCS6O14544 535 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 MRPS14O60783 128 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 RB1P06400 928 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 ALAS2P22557 587 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 MAPK8P45983 427 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLC9A3P48764 834 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 NXPE4Q6UWF7 544 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 RPTNQ6XPR3 784 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 CCDC86Q9H6F5 360 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 PTGFRNQ9P2B2 879 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 CHD9Q3L8U1 2897 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SH3D21A4FU49 640 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 ARHGEF9O43307 516 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 LYRM1O43325 122 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 TGM5O43548 720 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 RAB36O95755 333 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 POLR2LP62875 67 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 RHAGQ02094 409 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 MRPL28Q13084 256 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 ZSWIM7Q19AV6 140 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 QRFPRQ96P65 431 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SECISBP2Q96T21 854 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 NPIPB8E9PQR5 432 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 EEF1E1O43324 174 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 AKAP8O43823 692 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 PIP5K1CO60331 668 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 ZNF780AO75290 641 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 VIPR1P32241 457 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 IFNA8P32881 189 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 WASP42768 502 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 AGFG1P52594 562 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 TAS2R41P59536 307 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 RPS7P62081 194 aaKnown RBP16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 ILKQ13418 452 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 POU4F3Q15319 338 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 YIF1BQ5BJH7 314 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLX4IPQ5VYV7 408 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLC43A3Q8NBI5 491 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 FCRL1Q96LA6 429 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 BRF2Q9HAW0 419 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 EXTL2Q9UBQ6 330 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 WDFY3Q8IZQ1 3526 aa16.09■□□□□ 0.17
PPP4R3A-208ENST00000555462 TRBV23OR9-2A0A075B6M9 112 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 E9PQ18 207 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 FABP7O15540 132 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 ARHGEF15O94989 841 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 CRYZL1O95825 349 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 ADAP00813 363 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 GYPBP06028 91 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 MTNR1AP48039 350 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 NCBP2P52298 156 aaKnown RBP eCLIP16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 SP140Q13342 867 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 PRAMEF14Q5SWL7 426 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 PRAMEF13Q5VWM6 474 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 ZNF783Q6ZMS7 281 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 ZNF730Q6ZMV8 503 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 PROKR2Q8NFJ6 384 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLC23A2Q9UGH3 650 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 GRIP1Q9Y3R0 1128 aa16.08■□□□□ 0.17
PPP4R3A-208ENST00000555462 SLC5A10A0PJK1 596 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 PGRMC2O15173 223 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 LCMT2O60294 686 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 DRD5P21918 477 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 P2RX3P56373 397 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 WNT4P56705 351 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 DEFB103AP81534 67 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 SLC3A1Q07837 685 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 HYAL4Q2M3T9 481 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 C19orf48Q6RUI8 117 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 TMEM107Q6UX40 140 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 OR13C5Q8NGS8 318 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 OR9A1PQ8NGU1 263 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 C2orf15Q8WU43 125 aaKnown RBP16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 SPRYD4Q8WW59 207 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 KLHL31Q9H511 634 aa16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 C6orf106Q9H6K1 298 aaPredicted RBP16.08■□□□□ 0.16
PPP4R3A-208ENST00000555462 EVA1BQ9NVM1 165 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms