RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 KCNE3Q9Y6H6 103 aa10.03□□□□□ -0.8
TDP1-211ENST00000555178 URB1O60287 2271 aaKnown RBP10.02□□□□□ -0.8
TDP1-211ENST00000555178 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 FAM220BPB1ANY3 271 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 C17orf105B2RV13 164 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 HMGN4O00479 90 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 EMC8O43402 210 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 TNFRSF21O75509 655 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 SEC24DO94855 1032 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 AQP1P29972 269 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 ZNF267Q14586 743 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 SFT2D3Q587I9 215 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 IGF2-ASQ6U949 168 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 TMEM205Q6UW68 189 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 SPPL2CQ8IUH8 684 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 SLC44A2Q8IWA5 706 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 ESX1Q8N693 406 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 OR52R1Q8NGF1 315 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 OR2Y1Q8NGV0 311 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 FIG4Q92562 907 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 CTHRC1Q96CG8 243 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 WDR54Q9H977 334 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 LIN28AQ9H9Z2 209 aaKnown RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 MMACHCQ9Y4U1 282 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 V9GYQ6 96 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 EXPH5Q8NEV8 1989 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 NINQ8N4C6 2090 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 ELOVL7A1L3X0 281 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 BLACEA4D250 179 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 C9J4A7 227 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 PLOD2O00469 737 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 SOCS6O14544 535 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 EFSO43281 561 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 DDAH2O95865 285 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 OR12D1P0DN82 309 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 MATN1P21941 496 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 HTR1EP28566 365 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 OTX2P32243 289 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 ACTR3P61158 418 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 FUT5Q11128 374 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 CLN3Q13286 438 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 MAPK11Q15759 364 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 RPS26P11Q5JNZ5 115 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 KIRREL2Q6UWL6 708 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 C16orf47Q6ZP98 133 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 SERPINA11Q86U17 422 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 LSRQ86X29 649 aaPredicted RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 MICU2Q8IYU8 434 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 OR10Q1Q8NGQ4 319 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 SFXN5Q8TD22 340 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 ZNF675Q8TD23 568 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 REXO5Q96IC2 774 aaKnown RBP10.02□□□□□ -0.81
TDP1-211ENST00000555178 NUDT9Q9BW91 350 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 GMEB1Q9Y692 573 aa10.02□□□□□ -0.81
TDP1-211ENST00000555178 BOD1L1Q8NFC6 3051 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PCNX3Q9H6A9 2034 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 MED19A0JLT2 244 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 BCAS2O75934 225 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 PSMG1O95456 288 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 KRT75O95678 551 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 TNNI3P19429 210 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 GGT1P19440 569 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 GPR143P51810 404 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 DSTNP60981 165 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PRR5P85299 388 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 NNATQ16517 81 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 FXNQ16595 210 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 VMACQ2NL98 169 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 TBC1D25Q3MII6 688 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 MFSD12Q6NUT3 480 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 HMGN2P46Q86SG4 172 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PTRH1Q86Y79 214 aaKnown RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 IL22RA1Q8N6P7 574 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SLC16A11Q8NCK7 471 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 NFAM1Q8NET5 270 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 OR56A1Q8NGH5 318 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 NFKBIDQ8NI38 313 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 MS4A4EQ96PG1 132 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 C3orf14Q9HBI5 128 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 C14orf105Q9NVL8 296 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PTGFRNQ9P2B2 879 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 BCAP29Q9UHQ4 241 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 ZNF639Q9UID6 485 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 C19orf53Q9UNZ5 99 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SNX13Q9Y5W8 968 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 CXCR6O00574 342 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PLOD3O60568 738 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 KRT36O76013 467 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 BCHEP06276 602 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 ADRB1P08588 477 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 ACP2P11117 423 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 IL10P22301 178 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PPIBP23284 216 aaKnown RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 FOLR3P41439 243 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms