RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 RXFP3Q9NSD7 469 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 NENFQ9UMX5 172 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ASB4Q9Y574 426 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 FMO6PO60774 539 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 LCKP06239 509 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 CHMP24386 653 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 RPL35P42766 123 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SELENOWP63302 87 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 GTDC1Q4AE62 458 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 PDSS1Q5T2R2 415 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 DUS1LQ6P1R4 473 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 KDELC1Q6UW63 502 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ALDH16A1Q8IZ83 802 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 OR7G2Q8NG99 324 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 OR6C4Q8NGE1 309 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 PHB2Q99623 299 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF701Q9NV72 531 aaPredicted RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 NLKQ9UBE8 527 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 TNFRSF10BO14763 440 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 PCGF2P35227 344 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 CAPZA1P52907 286 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 RPS15AP62244 130 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 RPS21P63220 83 aaKnown RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 RELAQ04206 551 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF789Q5FWF6 425 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 CPZQ66K79 652 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.284e-7■□□□□ 8.1
VTI1B-204ENST00000554659 IGFN1Q86VF2 1251 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ARFGAP1Q8N6T3 406 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 SH3YL1Q96HL8 342 aaPredicted RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 OR5B12Q96R08 314 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 PTGES2Q9H7Z7 377 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 C19orf25Q9UFG5 118 aaPredicted RBP13.29□□□□□ -0.28
VTI1B-204ENST00000554659 AP1M2Q9Y6Q5 423 aa13.29□□□□□ -0.28
VTI1B-204ENST00000554659 KCNJ13O60928 360 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 RAB3BP20337 219 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 MAGEA3P43357 314 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 COMMD6Q7Z4G1 85 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 GALNT10Q86SR1 603 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SPARTQ8N0X7 666 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 INPP5KQ9BT40 448 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 C11orf49Q9H6J7 331 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 GORASP2Q9H8Y8 452 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 BRF2Q9HAW0 419 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 HRASLS2Q9NWW9 162 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ASB6Q9NWX5 421 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 TAS2R8Q9NYW2 309 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 COQ3Q9NZJ6 369 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 RIMS3Q9UJD0 308 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 A0A1W2PQL4 384 aaPredicted RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SERPINA11Q86U17 422 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 NINJ1Q92982 152 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 MAL2Q969L2 176 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 KATNBL1Q9H079 304 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 NOX1Q9Y5S8 564 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 GON4LQ3T8J9 2241 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 PTGESO14684 152 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 GPR37L1O60883 481 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 H2BFMP0C1H6 154 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SLC26A5P58743 744 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 FIP1L1Q6UN15 594 aaKnown RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 TSPAN33Q86UF1 283 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 KIF18BQ86Y91 864 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ZFP41Q8N8Y5 198 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 OR5M3Q8NGP4 307 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 IL17FQ96PD4 163 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 PELOQ9BRX2 385 aaKnown RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SLA2Q9H6Q3 261 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 EPHA6Q9UF33 1036 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 C2orf78A6NCI8 922 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 PHYHO14832 338 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 IFNA5P01569 189 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 PRSS56P0CW18 603 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 GPR4P46093 362 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ART1P52961 327 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 FOXA1P55317 472 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 DCP2Q8IU60 420 aaKnown RBP13.28□□□□□ -0.28
VTI1B-204ENST00000554659 OR6Q1Q8NGQ2 317 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ASB15Q8WXK1 588 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 BOCQ9BWV1 1114 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SLC2A4RGQ9NR83 387 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 NDUFAF4Q9P032 175 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 BACE2Q9Y5Z0 518 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 MYH6P13533 1939 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 MYH10P35580 1976 aa13.28□□□□□ -0.28
VTI1B-204ENST00000554659 ITGAMP11215 1152 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 ADH6P28332 368 aa13.27□□□□□ -0.28
VTI1B-204ENST00000554659 WNT4P56705 351 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms