RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TNFRSF12AQ9NP84 129 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 TMEM45AQ9NWC5 275 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 TUBA8Q9NY65 449 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CAPN7Q9Y6W3 813 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ANKHD1Q8IWZ3 2542 aaKnown RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 A0A1B0GVC2 190 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CFAP73A6NFT4 308 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 NPIPB8E9PQR5 432 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 PPP6CO00743 305 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 SKAP2O75563 359 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 PRKRAO75569 313 aaKnown RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 DNAJC8O75937 253 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR4F21O95013 312 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CLDN9O95484 217 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 TGFB1P01137 390 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 KRT6AP02538 564 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 KRT6BP04259 564 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 IGKV3-11P04433 115 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 TSPAN8P19075 237 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CNR1P21554 472 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 HIST1H1TP22492 207 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 HMOX2P30519 316 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 PIGAP37287 484 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 KRT6CP48668 564 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CORO7P57737 925 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 NCALDP61601 193 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 IRF8Q02556 426 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF791Q3KP31 576 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 GXYLT1Q4G148 440 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 C10orf62Q5T681 223 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 LIPJQ5W064 366 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CLEC6AQ6EIG7 209 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 TMEM211Q6ICI0 200 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 LETMD1Q6P1Q0 360 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 SPNS3Q6ZMD2 512 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 GK5Q6ZS86 529 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 SLC22A16Q86VW1 577 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR4N5Q8IXE1 308 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 C9orf40Q8IXQ3 194 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 LAS2Q8IYD9 372 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 GOLM1Q8NBJ4 401 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR4F6Q8NGB9 312 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR52B6Q8NGF0 335 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR8K3Q8NH51 312 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 METTL6Q8TCB7 284 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 DOK4Q8TEW6 326 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 CMTM5Q96DZ9 223 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 FAM173AQ9BQD7 235 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 OR51B5Q9H339 312 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 WDR55Q9H6Y2 383 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-215ENST00000554656 PROK2Q9HC23 129 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 ATG4BQ9Y4P1 393 aa9.75□□□□□ -0.85
SHMT2-215ENST00000554656 PRRC2AP48634 2157 aaKnown RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ZFHX3Q15911 3703 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 SYNDIG1LA6NDD5 238 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 LRRC3CA6NJW4 275 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 E9PBE3 544 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ACOT7O00154 380 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 PIP5K1BO14986 540 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 UBDO15205 165 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 JUNP05412 331 aaKnown RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 HOXD4P09016 255 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 T-ENOLP0DO92 83 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 GLI4P10075 376 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 PCNAP12004 261 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 LBPP18428 481 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 NCF2P19878 526 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ACVR2AP27037 513 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ADH7P40394 386 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 SSR2P43308 183 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 FOXA1P55317 472 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 DLX5P56178 289 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 TGM3Q08188 693 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 STX4Q12846 297 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 LAPTM5Q13571 262 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 SERTAD2Q14140 314 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 SQLEQ14534 574 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 HYAL4Q2M3T9 481 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 PIGGQ5H8A4 983 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 NDUFAF5Q5TEU4 345 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 C18orf63Q68DL7 685 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 NXNQ6DKJ4 435 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ASRGL1Q7L266 308 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 SPATA19Q7Z5L4 167 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 LIX1LQ8IVB5 337 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 FAM109AQ8N4B1 249 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 CDYL2Q8N8U2 506 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 OR7G3Q8NG95 312 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 OR5M3Q8NGP4 307 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 NRGNQ92686 78 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 PPWD1Q96BP3 646 aaKnown RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 TTYH2Q9BSA4 534 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 TBCDQ9BTW9 1192 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 CNPPD1Q9BV87 410 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF717Q9BY31 904 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-215ENST00000554656 LRMDAQ9H2I8 198 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 ACTR8Q9H981 624 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
SHMT2-215ENST00000554656 KCNJ16Q9NPI9 418 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms