RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SCN4AP35499 1836 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 URADA6NGE7 173 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 AZIN1O14977 448 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TOXO94900 526 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 GOT2P00505 430 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 M6PRP20645 277 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SLC5A3P53794 718 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ERMP1Q7Z2K6 904 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 NSUN3Q9H649 340 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 KIF13AQ9H1H9 1805 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 A0A087X1B8 175 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 WASH4PA8MWX3 477 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 POP7O75817 140 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF135P52742 658 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PSPHP78330 225 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TESK1Q15569 626 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 HES5Q5TA89 166 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 BORAQ6PGQ7 559 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 LRFN4Q6PJG9 635 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 FJX1Q86VR8 437 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 AGBL3Q8NEM8 1001 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 HPSE2Q8WWQ2 592 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SLC39A7Q92504 469 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 LRIG1Q96JA1 1093 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 C20orf24Q9BUV8 137 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ABHD16BQ9H3Z7 469 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ASIC5Q9NY37 505 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 AJAP1Q9UKB5 411 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TXNL1O43396 289 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 LDOC1O95751 146 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF12P17014 697 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ACADVLP49748 655 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PTCRAQ6ISU1 281 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 KCTD18Q6PI47 426 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 C4orf19Q8IY42 314 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 CREB3L4Q8TEY5 395 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PINK1Q9BXM7 581 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF717Q9BY31 904 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 LRMDAQ9H2I8 198 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 MINDY3Q9H8M7 445 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PNPLA3Q9NST1 481 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 KDM6AO15550 1401 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SPAARA0A1B0GVQ0 90 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF195O14628 629 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 HSD17B6O14756 317 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ARL2P36404 184 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 FOLR3P41439 243 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SNRPD2P62316 118 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 DEFB134Q4QY38 66 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PKDCCQ504Y2 493 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM198Q66K66 360 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 DPY19L3Q6ZPD9 716 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PGAP1Q75T13 922 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PDPRQ8NCN5 879 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF382Q96SR6 550 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 POLDIP3Q9BY77 421 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 CHRDQ9H2X0 955 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ARL2-SNX15V9GYD0 113 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 AGFG2O95081 481 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ANXA8P13928 327 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 CD40P25942 277 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 GNG10P50151 68 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 DOC2BQ14184 412 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 LACTB2Q53H82 288 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ABHD17BQ5VST6 288 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 RPL7L1Q6DKI1 246 aaKnown RBP3.15□□□□□ -1.9
SYNE2-212ENST00000554584 ZPBP2Q6X784 338 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SIRT6Q8N6T7 355 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 CHST14Q8NCH0 376 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 PITX2Q99697 317 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 SLC2A9Q9NRM0 540 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM9Q9P0T7 183 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 TRHDEQ9UKU6 1024 aa3.15□□□□□ -1.9
SYNE2-212ENST00000554584 GPR179Q6PRD1 2367 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 NAV3Q8IVL0 2385 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 ANKRD61A6NGH8 418 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 GPR39O43194 453 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 GADD45GO95257 159 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 P2RX1P51575 399 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 TUBA1BP68363 451 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 KYAT3Q6YP21 454 aaKnown RBP3.15□□□□□ -1.91
SYNE2-212ENST00000554584 TUBA1AQ71U36 451 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM184BQ9Y519 407 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-212ENST00000554584 ABCA8O94911 1581 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.91
SYNE2-212ENST00000554584 CDC14BO60729 498 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 PRAMEF11O60813 436 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 UGT2B11O75310 529 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 SLITRK3O94933 977 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 RAB36O95755 333 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 EMP2P54851 167 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 ACKR1Q16570 336 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 ZFP82Q8N141 532 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 PLD5Q8N7P1 536 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 PLXNB1O43157 2135 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 MON2Q7Z3U7 1717 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 LOC105369274A0A096LPK9 316 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 A0A1W2PNR3 127 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 KANTRA0A1W2PQU2 76 aa3.15□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF33AQ06730 810 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms