RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ALDOCP09972 364 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SLC35G6P0C7Q6 338 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 CCL4P13236 92 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PRPH2P23942 346 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 CSTF2P33240 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 BSGP35613 385 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ETV5P41161 510 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 STXBP1P61764 594 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RAE1P78406 368 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PHEXP78562 749 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 DGCR2P98153 550 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 MC2RQ01718 297 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ACY1Q03154 408 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 OCA2Q04671 838 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RGS1Q08116 209 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 AP5B1Q2VPB7 878 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 LSM12Q3MHD2 195 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 GALNTL6Q49A17 601 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RFTN2Q52LD8 501 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM35AQ53FP2 167 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TCTE1Q5JU00 501 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 C6orf136Q5SQH8 315 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 MANEAQ5SRI9 462 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TMTC4Q5T4D3 741 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PRAMEF17Q5VTA0 474 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 KHDRBS2Q5VWX1 349 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM198Q66K66 360 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 B3GNTL1Q67FW5 361 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF793Q6ZN11 406 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PRSS41Q7RTY9 318 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 COMMD6Q7Z4G1 85 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ZFAND4Q86XD8 727 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 MARCH9Q86YJ5 346 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 METTL4Q8N3J2 472 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 C1orf52Q8N6N3 182 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 AMER3Q8N944 861 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 OR2L5Q8NG80 312 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ZCCHC10Q8TBK6 192 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 CPT1CQ8TCG5 803 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 BRIX1Q8TDN6 353 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TUBGCP3Q96CW5 907 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 FCRL1Q96LA6 429 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PPP3R2Q96LZ3 170 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TEFMQ96QE5 360 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 OR6C1Q96RD1 312 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 DCLRE1CQ96SD1 692 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SIKE1Q9BRV8 207 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 RTKNQ9BST9 563 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 CCDC28BQ9BUN5 200 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SORBS1Q9BX66 1292 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 MRPL1Q9BYD6 325 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 DPH1Q9BZG8 443 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 REXO4Q9GZR2 422 aaKnown RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 APMAPQ9HDC9 416 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 TCF7L2Q9NQB0 619 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PFDN4Q9NQP4 134 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-212ENST00000554486 PARPBPQ9NWS1 579 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 C1orf109Q9NX04 203 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 SERTAD3Q9UJW9 196 aa5.93□□□□□ -1.46
SCFD1-212ENST00000554486 NUP214P35658 2090 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 DCHS1Q96JQ0 3298 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SDK2Q58EX2 2172 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 CCDC187A0A096LP49 1063 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 A0A0A6YYD5 115 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 HYKKA2RU49 373 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FAM149AA5PLN7 773 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF785A8K8V0 405 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 B4E171 279 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 DIRC3C9JPN6 131 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 E9PBE3 544 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ZSCAN9O15535 394 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FRS3O43559 492 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 KLHL41O60662 606 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 DNAJB6O75190 326 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SEC22BO75396 215 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 OR2B3O76000 313 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SCELO95171 688 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 KLK1P06870 262 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FGF5P12034 268 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 BCKDHAP12694 445 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 LBPP18428 481 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ITIH1P19827 911 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ATP5A1P25705 553 aaKnown RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 TSPAN7P41732 249 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 RAP1GDS1P52306 607 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 PLA2G16P53816 162 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 RAB8AP61006 207 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ERVK-8P63133 956 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 RPL38P63173 70 aaKnown RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 BTN3A2P78410 334 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 EMX2Q04743 252 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 FOXM1Q08050 763 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ACSM2AQ08AH3 577 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 HABP2Q14520 560 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-212ENST00000554486 IL11RAQ14626 422 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 SMU1Q2TAY7 513 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ATP6AP1LQ52LC2 224 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 GARNL3Q5VVW2 1013 aa5.92□□□□□ -1.46
SCFD1-212ENST00000554486 ACSM2BQ68CK6 577 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms