RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 KAT8Q9H7Z6 458 aaKnown RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 DUSP22Q9NRW4 184 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 SLC6A13Q9NSD5 602 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 EXD2Q9NVH0 621 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 GPATCH2Q9NW75 528 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 P2RX2Q9UBL9 471 aa13.51□□□□□ -0.25
SHMT2-210ENST00000553950 HEMK1Q9Y5R4 338 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-210ENST00000553950 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 OR2W5A6NFC9 320 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 NME4O00746 187 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 GMNNO75496 209 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 DDAH2O95865 285 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 ALOX5P09917 674 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 CT62P0C5K7 136 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 COX6A1P12074 109 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 MATN1P21941 496 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 CLCN2P51788 898 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 SLC37A1P57057 533 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 RPS18P62269 152 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 HPCAP84074 193 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 EEF1A2Q05639 463 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 PCOLCEQ15113 449 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF630Q2M218 657 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 TRMT12Q53H54 448 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 INTS11Q5TA45 600 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 HLA-DQA1Q5Y7H0 255 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 PLAG1Q6DJT9 500 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 PPP1R32Q7Z5V6 425 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 NET1Q7Z628 596 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 MRGPREQ86SM8 312 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 SLC15A3Q8IY34 581 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 C11orf65Q8NCR3 313 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 OR2T12Q8NG77 320 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 OR5L2Q8NGL0 311 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 M1APQ8TC57 530 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 PNPT1Q8TCS8 783 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 ADAMTS15Q8TE58 950 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF721Q8TF20 911 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 THAP4Q8WY91 577 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 CDRT15Q96T59 188 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 KCTD14Q9BQ13 255 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 LMF2Q9BU23 707 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 TMEM38AQ9H6F2 299 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 Q9N2J8 555 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 EQTNQ9NQ60 294 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 CALML5Q9NZT1 146 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
SHMT2-210ENST00000553950 LIPT1Q9Y234 373 aa13.5□□□□□ -0.25
SHMT2-210ENST00000553950 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 MYOCOSA0A1B0GUC4 107 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF891A8MT65 544 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 A8MUA0 341 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 SOCS6O14544 535 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ACOX3O15254 700 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 GSC2O15499 205 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 CIB2O75838 187 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 LIFP15018 202 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ME2P23368 584 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 SSTR4P31391 388 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 RRADP55042 308 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 LIPEQ05469 1076 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 CLN3Q13286 438 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 MYBPC3Q14896 1274 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 EXOSC7Q15024 291 aaKnown RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 PIGGQ5H8A4 983 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ULK2Q8IYT8 1036 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 FBXW8Q8N3Y1 598 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ZNF615Q8N8J6 731 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 OR11G2Q8NGC1 345 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 OR10A6Q8NH74 314 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 HOXB13Q92826 284 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 NCLNQ969V3 563 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 GIMAP5Q96F15 307 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 FER1L6-AS2Q96M78 137 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 VSTM2LQ96N03 204 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 BTBD9Q96Q07 612 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 WDR77Q9BQA1 342 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 OR51I1Q9H343 314 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 PIGUQ9H490 435 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 FOLH1BQ9HBA9 442 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 MMP25Q9NPA2 562 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 A4GALTQ9NPC4 353 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 CMTM6Q9NX76 183 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 MRTO4Q9UKD2 239 aaKnown RBP13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ERVK-11Q9UQG0 969 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ANGPT4Q9Y264 503 aa13.49□□□□□ -0.25
SHMT2-210ENST00000553950 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 FRG2CA6NGY1 282 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 S1PR1P21453 382 aa13.48□□□□□ -0.25
SHMT2-210ENST00000553950 HTR1EP28566 365 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms