RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 WDR34Q96EX3 536 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 RADILQ96JH8 1075 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 HSH2DQ96JZ2 352 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 LINC00615Q96LM1 132 aaPredicted RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 OPALINQ96PE5 141 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 TMEM121BQ9BXQ6 578 aaPredicted RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 SRRQ9GZT4 340 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 TMEM168Q9H0V1 697 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 OR52A5Q9H2C5 316 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PRSS16Q9NQE7 514 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 DMRT3Q9NQL9 472 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 HPF1Q9NWY4 346 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PDP1Q9P0J1 537 aaPredicted RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 BTNL2Q9UIR0 455 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PCDHGA12O60330 932 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 VIPP01282 170 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 EPHX1P07099 455 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 FCARP24071 287 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 WASP42768 502 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 ASMTP46597 345 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 MAP2K3P46734 347 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 IDH2P48735 452 aaKnown RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 DAPP51397 102 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 ZNF81P51508 661 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 MVDP53602 400 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PNLIPRP1P54315 467 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 HBA1P69905 142 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 KEAP1Q14145 624 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 RGNQ15493 299 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 ZNF79Q15937 498 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 SNAPC1Q16533 368 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 IQCCQ4KMZ1 466 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 ZC3H12BQ5HYM0 836 aaKnown RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 FAM180BQ6P0A1 224 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 SHQ1Q6PI26 577 aaKnown RBP8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 CORO6Q6QEF8 472 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 NXPE4Q6UWF7 544 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 CAMKMTQ7Z624 323 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 GPAT4Q86UL3 456 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PGBD3Q8N328 593 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 LRRC17Q8N6Y2 441 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 OR6M1Q8NGM8 313 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 GHITMQ9H3K2 345 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 SLAMF7Q9NQ25 335 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 PRELID3BQ9Y3B1 194 aa8.55□□□□□ -1.04
AL049839.2-201ENST00000553947 YKT6O15498 198 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ORC5O43913 435 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RAF1P04049 648 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 POU2F2P09086 479 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PCSK2P16519 638 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 MAPK9P45984 424 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TGM4P49221 684 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RPP38P78345 283 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 EXOSC2Q13868 293 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PIP5KL1Q5T9C9 394 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 KIAA1614Q5VZ46 1190 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 OR2T5Q6IEZ7 315 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 EIF3MQ7L2H7 374 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 OR4A15Q8NGL6 344 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 OR2T29Q8NH02 315 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 UFD1Q92890 307 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 REPS1Q96D71 796 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TPD52L3Q96J77 140 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 LINC00052Q96N35 136 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 C3orf14Q9HBI5 128 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 GPR83Q9NYM4 423 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ACSL6Q9UKU0 697 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RAB23Q9ULC3 237 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ASF1AQ9Y294 204 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 V9GYH0 126 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ATG2AQ2TAZ0 1938 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 DOCK9Q9BZ29 2069 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 A0A0B4J203 849 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 C17orf113A0A1B0GUU1 675 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 IGLON5A6NGN9 336 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 MRPS14O60783 128 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 C6orf47O95873 294 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 TBX6O95947 436 aaPredicted RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PTHP01270 115 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 PCCBP05166 539 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 FABP3P05413 133 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RB1P06400 928 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 KLK1P06870 262 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 CSF3P09919 207 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 HOXB1P14653 301 aaPredicted RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 GPC1P35052 558 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 GDI2P50395 445 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RORCP51449 518 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 RPL6Q02878 288 aaKnown RBP8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 ZNF763Q0D2J5 394 aa8.54□□□□□ -1.04
AL049839.2-201ENST00000553947 C2orf80Q0P641 193 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms