RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SYPL1Q16563 259 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 C6orf120Q7Z4R8 191 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 TECPR1Q7Z6L1 1165 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 ADGRF3Q8IZF5 1079 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 DNAJC5GQ8N7S2 189 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 ARIH2OSQ8N7S6 290 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 NEIL3Q8TAT5 605 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 WDR34Q96EX3 536 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 HYLS1Q96M11 299 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SERHL2Q9H4I8 314 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 B3GNT2Q9NY97 397 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CFAP97Q9P2B7 532 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 KCNN3Q9UGI6 736 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CLCA2Q9UQC9 943 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 COL4A6Q14031 1691 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 A0A1W2PRQ8 180 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 PRAMEF27A3QJZ7 478 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 QSOX1O00391 747 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 DVL2O14641 736 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SHOXO15266 292 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SCO1O75880 301 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 C1orf105O95561 183 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SMSP52788 366 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SMIM11AP58511 58 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 DEFB103AP81534 67 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 FCN2Q15485 313 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 DUSP6Q16828 381 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SPDYE7PQ495Y7 208 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 PHF21AQ96BD5 680 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 FNDC11Q9BVV2 318 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CPEB1Q9BZB8 566 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 ISYNA1Q9NPH2 558 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 MRPS18AQ9NVS2 196 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
HDAC7-228ENST00000548938 HS3ST2Q9Y278 367 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
HDAC7-228ENST00000548938 CD8B2A6NJW9 211 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 GABRPO00591 440 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 ABLIM3O94929 683 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 POP4O95707 220 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 PAHP00439 452 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CD8BP10966 210 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 PRLHRP49683 370 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 COX10Q12887 443 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 RIN1Q13671 783 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 GPR176Q14439 515 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 HENMT1Q5T8I9 393 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 HIST2H2AA3Q6FI13 130 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CD300LDQ6UXZ3 194 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 IKBIPQ70UQ0 350 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 MORN4Q8NDC4 146 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 OR8D4Q8NGM9 314 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SLC5A11Q8WWX8 675 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CREB3L1Q96BA8 519 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 OTUB1Q96FW1 271 aaPredicted RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 PAWRQ96IZ0 340 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 HDHD2Q9H0R4 259 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 B8ZZF3 427 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 PRRG1O14668 218 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CHP2O43745 196 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 LANCL1O43813 399 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 AKAP8O43823 692 aaKnown RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CKMP06732 381 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CSF2RAP15509 400 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 ELK1P19419 428 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 CELP19835 753 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 M6PRP20645 277 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SLC1A3P43003 542 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF791Q3KP31 576 aaPredicted RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 MINDY4Q4G0A6 757 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 BCL2L15Q5TBC7 163 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 TMEM220Q6QAJ8 160 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 NXPE4Q6UWF7 544 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 GDPD4Q6W3E5 623 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SZRD1Q7Z422 152 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 TRAM1L1Q8N609 369 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 OR5D16Q8NGK9 328 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF689Q96CS4 500 aaPredicted RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF607Q96SK3 696 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SGPP1Q9BX95 441 aa12.94□□□□□ -0.34
HDAC7-228ENST00000548938 SIRT3Q9NTG7 399 aaPredicted RBP12.94□□□□□ -0.34
HDAC7-228ENST00000548938 PDPK1O15530 556 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 MMP20O60882 483 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 OLFM2O95897 454 aa12.93□□□□□ -0.34
HDAC7-228ENST00000548938 PRKACBP22694 351 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms