RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KIRREL2Q6UWL6 708 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MSANTD1Q6ZTZ1 278 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ANKRD46Q86W74 232 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 TREML1Q86YW5 311 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 CCDC116Q8IYX3 515 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 CLECL1Q8IZS7 167 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 POU5F2Q8N7G0 328 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 OR9A2Q8NGT5 310 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 PPWD1Q96BP3 646 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 RBM18Q96H35 190 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 THOC3Q96J01 351 aaKnown RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ZNF681Q96N22 645 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 AMDHD1Q96NU7 426 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 GLIPR2Q9H4G4 154 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 RMND5AQ9H871 391 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ZBTB20Q9HC78 741 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 ACSS1Q9NUB1 689 aaPredicted RBP11.23□□□□□ -0.61
HDAC7-226ENST00000547259 OLAHQ9NV23 265 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 PCDHGB4Q9UN71 923 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 NTNG1Q9Y2I2 539 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
HDAC7-226ENST00000547259 IGHV3-20A0A0C4DH32 117 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 PRSS51A0A1B0GVH4 220 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 A0A1W2PP18 115 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 BBIP1A8MTZ0 92 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 C17orf105B2RV13 164 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 RNASET2O00584 256 aaKnown RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SOCS6O14544 535 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 DYRK3O43781 588 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 HPP00738 406 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 ABCB1P08183 1280 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 COX4I1P13073 169 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SOAT1P35610 550 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 FRKP42685 505 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 WNT3P56703 355 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 PHC1P78364 1004 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 CYLC2Q14093 348 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 LTB4RQ15722 352 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 C6orf10Q5SRN2 563 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SP5Q6BEB4 398 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 PAPD4Q6PIY7 484 aaKnown RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SLC2A7Q6PXP3 512 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 ZNF551Q7Z340 670 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 GALNT12Q8IXK2 581 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 KBTBD2Q8IY47 623 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 FITM2Q8N6M3 262 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 OR11G2Q8NGC1 345 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 OR4A15Q8NGL6 344 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 OR14A16Q8NHC5 309 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SUN3Q8TAQ9 357 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 TSPEARQ8WU66 669 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 OR5P2Q8WZ92 322 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 RIT1Q92963 219 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 ITCHQ96J02 903 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 CCDC115Q96NT0 180 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 PANX1Q96RD7 426 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 LPAR4Q99677 370 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 NEUROD4Q9HD90 331 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 SUCOQ9UBS9 1254 aaKnown RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 BTNL2Q9UIR0 455 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 LEF1Q9UJU2 399 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-226ENST00000547259 NDUFAF1Q9Y375 327 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
HDAC7-226ENST00000547259 LOC102723996A0A087X1L8 192 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 TRAV17A0A0B4J275 112 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ASPDHA6ND91 283 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SAGE2PA6NJ88 616 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 CAPN14A8MX76 684 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 RFXANKO14593 260 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SCN2BO60939 215 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 KRT34O76011 436 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SEC24DO94855 1032 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SLITRK5O94991 958 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ANP32DO95626 131 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ICAM2P13598 275 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 PRDX6P30041 224 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 GALNSP34059 522 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 MC3RP41968 323 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 CDK9P50750 372 aaKnown RBP11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ARG2P78540 354 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 GABPB1Q06547 395 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ART3Q13508 389 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 MLC1Q15049 377 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SPRED3Q2MJR0 410 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 SPDYE7PQ495Y7 208 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 ZNF628Q5EBL2 1059 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 FAM91A1Q658Y4 838 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 REP15Q6BDI9 236 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 TMEM107Q6UX40 140 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 DGAT2L6Q6ZPD8 337 aa11.21□□□□□ -0.61
HDAC7-226ENST00000547259 TRPM8Q7Z2W7 1104 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms