RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNHG1-223ENST00000545440 TRPS1Q9UHF7 1281 aa7.11□□□□□ -1.27
SNHG1-223ENST00000545440 ADAM29Q9UKF5 820 aa7.11□□□□□ -1.27
SNHG1-223ENST00000545440 STK38LQ9Y2H1 464 aa7.11□□□□□ -1.27
SNHG1-223ENST00000545440 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
SNHG1-223ENST00000545440 ASB4Q9Y574 426 aa7.11□□□□□ -1.27
SNHG1-223ENST00000545440 INTS1Q8N201 2190 aaKnown RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 DOCK7Q96N67 2140 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 A0A1W2PR48 441 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 A8MVJ9 347 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 KLRC4-KLRK1H3BQV0 150 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 EEDO75530 441 aaKnown RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 AIFM1O95831 613 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 GSTA1P08263 222 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 FAM58BPP0C7Q3 252 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ALOX15P16050 662 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TNNI3P19429 210 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 POU3F2P20265 443 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TACR1P25103 407 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 SOX3P41225 446 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 MEOX1P50221 254 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 NEK2P51955 445 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 CASP6P55212 293 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ID2Q02363 134 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 SLC29A2Q14542 456 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 RASA2Q15283 850 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 C18orf63Q68DL7 685 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TTC19Q6DKK2 380 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 Q6ZPB1 254 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 PAGE2Q7Z2X7 111 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 MILR1Q7Z6M3 343 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 SLC22A9Q8IVM8 553 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 GSPT2Q8IYD1 628 aaKnown RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 DND1Q8IYX4 353 aaKnown RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 GHDCQ8N2G8 530 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF321PQ8N8H1 164 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ZFP62Q8NB50 900 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 MZB1Q8WU39 189 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.1□□□□□ -1.276e-13■■□□□ 14.1
SNHG1-223ENST00000545440 RBM18Q96H35 190 aaKnown RBP7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TMEM237Q96Q45 408 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF382Q96SR6 550 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 HPF1Q9NWY4 346 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 AHSPQ9NZD4 102 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TMEM216Q9P0N5 145 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 SNX6Q9UNH7 406 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ERVK-11Q9UQG0 969 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF835Q9Y2P0 537 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 X6R8D5 127 aa7.1□□□□□ -1.27
SNHG1-223ENST00000545440 TRGV8A0A0C4DH27 118 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 A0A1B0GTL3 188 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ARHGAP10A1A4S6 786 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 OR6C76A6NM76 312 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 NPIPA5E9PKD4 350 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ACOT7O00154 380 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 WWP2O00308 870 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 TFECO14948 347 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ASNA1O43681 348 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 PEX1O43933 1283 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 OR10H2O60403 315 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ZG16O60844 167 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 GLRA3O75311 464 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 GUCY1B2O75343 617 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 PRKRAO75569 313 aaKnown RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 OR6B1O95007 311 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 GPR75O95800 540 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 HSD3B1P14060 373 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ATP5F1P24539 256 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 FPR2P25090 351 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 MAPK12P53778 367 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 PRKAA2P54646 552 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 CDH13P55290 713 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 NAA20P61599 178 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ERVK-8P63133 956 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 GALNT1Q10472 559 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 CSTF3Q12996 717 aaKnown RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 LCP2Q13094 533 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF678Q5SXM1 525 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 OPN5Q6U736 354 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 C16orf47Q6ZP98 133 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 RTL4Q6ZR62 310 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 GPRIN3Q6ZVF9 776 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 COMMD6Q7Z4G1 85 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 MDGA2Q7Z553 956 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 THNSL2Q86YJ6 484 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 OR4N5Q8IXE1 308 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 C9orf40Q8IXQ3 194 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 METTL4Q8N3J2 472 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 C16orf52Q8NHV5 167 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 SLC22A8Q8TCC7 542 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 TRPC4APQ8TEL6 797 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 SELENOMQ8WWX9 145 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 RIT1Q92963 219 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 CCDC126Q96EE4 140 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 L3HYPDHQ96EM0 354 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 SENP5Q96HI0 755 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-223ENST00000545440 SGCZQ96LD1 299 aa7.09□□□□□ -1.27
SNHG1-223ENST00000545440 CNPPD1Q9BV87 410 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms