RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PRAMEF20	Q5VT98	475 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	NUP54	Q7Z3B4	507 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	CCDC116	Q8IYX3	515 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	MARVELD2	Q8N4S9	558 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	ACBD4	Q8NC06	268 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	ADCY4	Q8NFM4	1077 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	OR52R1	Q8NGF1	315 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	HGD	Q93099	445 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	VSTM2L	Q96N03	204 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	SMC6	Q96SB8	1091 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	DOHH	Q9BU89	302 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	ITPA	Q9BY32	194 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	IQCG	Q9H095	443 aa	Known RBP	12.3	□□□□□ -0.44
POLE-222	ENST00000545015	UBQLN3	Q9H347	655 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	GIMAP4	Q9NUV9	329 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	SENP1	Q9P0U3	644 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	EXO1	Q9UQ84	846 aa	Known RBP	12.3	□□□□□ -0.44
POLE-222	ENST00000545015	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.3	□□□□□ -0.44
POLE-222	ENST00000545015	LIPG	Q9Y5X9	500 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	CELSR2	Q9HCU4	2923 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015		A0A087WV62	115 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SLC28A1	O00337	649 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	TBX19	O60806	448 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	CRCP	O75575	148 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	HOXD4	P09016	255 aa	Predicted RBP	12.29	□□□□□ -0.44
POLE-222	ENST00000545015	CELA3A	P09093	270 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	HTR1E	P28566	365 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	ALDH3A1	P30838	453 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SERPINB5	P36952	375 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	MAN2A2	P49641	1150 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	MRPS35	P82673	323 aa	Known RBP	12.29	□□□□□ -0.44
POLE-222	ENST00000545015	BTK	Q06187	659 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	IFFO1	Q0D2I5	559 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SNTA1	Q13424	505 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	EXOSC7	Q15024	291 aa	Known RBP	12.29	□□□□□ -0.44
POLE-222	ENST00000545015	FNDC7	Q5VTL7	733 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	KANK2	Q63ZY3	851 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	TMEM198	Q66K66	360 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	NOXRED1	Q6NXP6	359 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	FAM180B	Q6P0A1	224 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	TMEM64	Q6YI46	380 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015		Q6ZSR9	355 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SRRM1	Q8IYB3	904 aa	Known RBP	12.29	□□□□□ -0.44
POLE-222	ENST00000545015	FAM9C	Q8IZT9	166 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SIMC1	Q8NDZ2	872 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	OR9A2	Q8NGT5	310 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	OR6Y1	Q8NGX8	325 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	DIO2	Q92813	273 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	EXOSC8	Q96B26	276 aa	Known RBP	12.29	□□□□□ -0.44
POLE-222	ENST00000545015	SARAF	Q96BY9	339 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	TMEM41A	Q96HV5	264 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF597	Q96LX8	424 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	EBPL	Q9BY08	206 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	C1orf109	Q9NX04	203 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	B4GALT7	Q9UBV7	327 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	BCAP29	Q9UHQ4	241 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	RAB21	Q9UL25	225 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	DNAJC15	Q9Y5T4	150 aa		12.29	□□□□□ -0.44
POLE-222	ENST00000545015	TRGV5	A0A0B4J1U4	118 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ATP6AP2	A0A1C7CYW4	349 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	FIGNL2	A6NMB9	653 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	NPIPA2	E9PIF3	369 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	NPIPA3	F8WFD2	350 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	PLOD2	O00469	737 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	RGS14	O43566	566 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	TYROBP	O43914	113 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ABCB7	O75027	752 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ATP6AP2	O75787	350 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	PSMG1	O95456	288 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	HPN	P05981	417 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	TUBB	P07437	444 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CT45A8	P0DMV1	189 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CT45A9	P0DMV2	189 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ENDOU	P21128	410 aa	Known RBP	12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ELAVL4	P26378	380 aa	Known RBP	12.28	□□□□□ -0.44
POLE-222	ENST00000545015	GRN	P28799	593 aa	Known RBP	12.28	□□□□□ -0.44
POLE-222	ENST00000545015	C2orf80	Q0P641	193 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CDSN	Q15517	529 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	PRSS53	Q2L4Q9	553 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	UGT3A2	Q3SY77	523 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CT45A2	Q5DJT8	189 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CLEC6A	Q6EIG7	209 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	SLC30A6	Q6NXT4	461 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CLYBL	Q8N0X4	340 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	NEIL3	Q8TAT5	605 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	TCP10L	Q8TDR4	215 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	RNF138	Q8WVD3	245 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	ASB5	Q8WWX0	329 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	OMA1	Q96E52	524 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	SLC35A4	Q96G79	324 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	RILP	Q96NA2	401 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	FAM111A	Q96PZ2	611 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	CCT7	Q99832	543 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	PARD6B	Q9BYG5	372 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	TUBB1	Q9H4B7	451 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	LRTM1	Q9HBL6	345 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	PNPLA3	Q9NST1	481 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	SLC17A7	Q9P2U7	560 aa		12.28	□□□□□ -0.44
POLE-222	ENST00000545015	TMED5	Q9Y3A6	229 aa		12.28	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms