RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR2A2Q6IF42 318 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 FAM166AQ6J272 317 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ADAM5Q6NVV9 412 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ALKBH5Q6P6C2 394 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MFSD7Q6UXD7 560 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 DNM1P46Q6ZS02 220 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ADGRE4PQ86SQ3 457 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 LINC00523Q86TU6 105 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 C17orf64Q86WR6 236 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 PLD3Q8IV08 490 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 CDKL3Q8IVW4 592 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MPP5Q8N3R9 675 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 SLC15A4Q8N697 577 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 C3orf56Q8N813 242 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MFSD9Q8NBP5 474 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MORN4Q8NDC4 146 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF740Q8NDX6 193 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 OR4L1Q8NH43 312 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 OR14A16Q8NHC5 309 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 NUBPLQ8TB37 319 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 LKAAEAR1Q8TD35 194 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 PEX13Q92968 403 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ABTB1Q969K4 478 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 HAUS1Q96CS2 278 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 WDYHV1Q96HA8 205 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 PDLIM2Q96JY6 352 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 CLPTM1LQ96KA5 538 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MARK4Q96L34 752 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 KRT12Q99456 494 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 DOHHQ9BU89 302 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 LIN28AQ9H9Z2 209 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 SH2D2AQ9NP31 389 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 FANCFQ9NPI8 374 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 SEMA4BQ9NPR2 832 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 NECTIN3Q9NQS3 549 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 PRTFDC1Q9NRG1 225 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ABCF3Q9NUQ8 709 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 COPS7AQ9UBW8 275 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 PTBP2Q9UKA9 531 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 RIMKLBQ9ULI2 386 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 RUVBL2Q9Y230 463 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MRPS33Q9Y291 106 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 CLCA3PQ9Y6N3 262 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 ANKRD12Q6UB98 2062 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 INTS1Q8N201 2190 aaKnown RBP3.7□□□□□ -1.82
SNHG1-220ENST00000544550 CCDC88CQ9P219 2028 aa3.7□□□□□ -1.82
SNHG1-220ENST00000544550 MXRA5Q9NR99 2828 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 A0A1W2PNV4 684 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 GRID2IPA4D2P6 1211 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 KRT87PA6NCN2 255 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FRG2CA6NGY1 282 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 LRRC3CA6NJW4 275 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CAPN14A8MX76 684 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 H0Y3Z8 333 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 H7C0C1 242 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TP53I11O14683 189 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PSMD3O43242 534 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZBTB14O43829 449 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PRKNO60260 465 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 GPRIN2O60269 458 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 OR10H2O60403 315 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CDH16O75309 829 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TNFSF13O75888 250 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SNX4O95219 450 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SYF2O95926 243 aaKnown RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 IGHV4-39P01824 125 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 IFNA16P05015 189 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SERPING1P05155 500 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SKILP12757 684 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CPN1P15169 458 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 DDCP20711 480 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF10P21506 573 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 LOXP28300 417 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SERPINB3P29508 390 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CDKN2BP42772 138 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ATP5OP48047 213 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SLC6A12P48065 614 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 GZMKP49863 264 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 NUDT6P53370 316 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 UBE2HP62256 183 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ACTG1P63261 375 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 RPP38P78345 283 aaKnown RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 OLR1P78380 273 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 MYL5Q02045 173 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FOXF2Q12947 444 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SLC13A2Q13183 592 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SP140Q13342 867 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 SPARCL1Q14515 664 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ZNF791Q3KP31 576 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-220ENST00000544550 TTLL9Q3SXZ7 439 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PIGGQ5H8A4 983 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 FAM120AOSQ5T036 256 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 PRAMEF20Q5VT98 475 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 CLEC2AQ6UVW9 174 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 ENPP6Q6UWR7 440 aa3.69□□□□□ -1.82
SNHG1-220ENST00000544550 LCNL1Q6ZST4 164 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms