RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 M0QX08 132 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 CASQ2O14958 399 aaPredicted RBP28.4■■■□□ 2.14
CCM2-219ENST00000544363 TPST1O60507 370 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 COQ9O75208 318 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 PGM3O95394 542 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 AGR2O95994 175 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 FCGR1AP12314 374 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 EFNA3P52797 238 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 GNA13Q14344 377 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 EXOSC6Q5RKV6 272 aaKnown RBP28.4■■■□□ 2.14
CCM2-219ENST00000544363 GLRX5Q86SX6 157 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 PRSS58Q8IYP2 241 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 SLC16A11Q8NCK7 471 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 OR52R1Q8NGF1 315 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 OR10Q1Q8NGQ4 319 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 SLC35A4Q96G79 324 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 VN1R1Q9GZP7 353 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 MKL2Q9ULH7 1088 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 MEN1O00255 615 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 RECKO95980 971 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 IFNA14P01570 189 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 FASP25445 335 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 ZNF267Q14586 743 aaPredicted RBP28.39■■■□□ 2.13
CCM2-219ENST00000544363 RPS26P11Q5JNZ5 115 aaPredicted RBP28.39■■■□□ 2.13
CCM2-219ENST00000544363 OVCH1Q7RTY7 1134 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 WDR53Q7Z5U6 358 aaPredicted RBP28.39■■■□□ 2.13
CCM2-219ENST00000544363 LAPTM4BQ86VI4 370 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 ANKFN1Q8N957 763 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 CDRT4Q8N9R6 151 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 PLPP5Q8NEB5 264 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 SLC9A6Q92581 669 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 TAMM41Q96BW9 452 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 YY1AP1Q9H869 796 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 C14orf105Q9NVL8 296 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 LIPT1Q9Y234 373 aa28.39■■■□□ 2.13
CCM2-219ENST00000544363 TCRBV16S1A1N1A0A5B0 115 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 SUV39H1O43463 412 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 ZGLP1P0C6A0 271 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 ACP2P11117 423 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 ZNF28P17035 718 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 TNNI3P19429 210 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 VHLP40337 213 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 FUT5Q11128 374 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 DUSP8Q13202 625 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 TRIP10Q15642 601 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 ATAD3BQ5T9A4 648 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 HMBOX1Q6NT76 420 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 LIN37Q96GY3 246 aaPredicted RBP28.38■■■□□ 2.13
CCM2-219ENST00000544363 PNO1Q9NRX1 252 aaKnown RBP28.38■■■□□ 2.13
CCM2-219ENST00000544363 AGPAT4Q9NRZ5 378 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 EXD2Q9NVH0 621 aa28.38■■■□□ 2.13
CCM2-219ENST00000544363 PDE9AO76083 593 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 MT-CO3P00414 261 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 CRISP3P54108 245 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 CLDN6P56747 220 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 SELENOWP63302 87 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 FUT7Q11130 342 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 AMIGO2Q86SJ2 522 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 PMEPA1Q969W9 287 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 HSH2DQ96JZ2 352 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 LRFN5Q96NI6 719 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 TREX2Q9BQ50 279 aaPredicted RBP28.37■■■□□ 2.13
CCM2-219ENST00000544363 PIGUQ9H490 435 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 BCL2L10Q9HD36 194 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 GIN1Q9NXP7 522 aa28.37■■■□□ 2.13
CCM2-219ENST00000544363 IFT80Q9P2H3 777 aaPredicted RBP28.37■■■□□ 2.13
CCM2-219ENST00000544363 C17orf105B2RV13 164 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 TMEM229AB2RXF0 380 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 HRKO00198 91 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 CSO75390 466 aaKnown RBP28.36■■■□□ 2.13
CCM2-219ENST00000544363 MT-ND1P03886 318 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 OPN1SWP03999 348 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 ITIH1P19827 911 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 AGXTP21549 392 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 SSTR4P31391 388 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 PGDP52209 483 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 NSDHLQ15738 373 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 DUSP5Q16690 384 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 PRAMEF8Q5VWM4 474 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 PRAMEF7Q5VXH5 474 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 HEPHL1Q6MZM0 1159 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 RAB11FIP2Q7L804 512 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 VTCN1Q7Z7D3 282 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 PTPMT1Q8WUK0 201 aaPredicted RBP28.36■■■□□ 2.13
CCM2-219ENST00000544363 TPD52L3Q96J77 140 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 DOHHQ9BU89 302 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 CNPPD1Q9BV87 410 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 ERVK-19Q9WJR5 959 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 KIF26BQ2KJY2 2108 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 SYNDIG1LA6NDD5 238 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 ALOX5P09917 674 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 MAP3K8P41279 467 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 RAB15P59190 212 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 GPAT3Q53EU6 434 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 DHRS13Q6UX07 377 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 TMEM151BQ8IW70 566 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 BBS10Q8TAM1 723 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 CDS1Q92903 461 aa28.36■■■□□ 2.13
CCM2-219ENST00000544363 TRNT1Q96Q11 434 aaKnown RBP28.36■■■□□ 2.13
CCM2-219ENST00000544363 ZNF607Q96SK3 696 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms