RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FOLH1BQ9HBA9 442 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 VPS4AQ9UN37 437 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CAPN7Q9Y6W3 813 aa13.42□□□□□ -0.26
TNFRSF1A-216ENST00000543995 RNF103-CHMP3A0A140T963 221 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 A0A1W2PP18 115 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TMEM200CA6NKL6 621 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ANGPT2O15123 496 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ERN1O75460 977 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR2J2O76002 312 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 GSNP06396 782 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CD1EP15812 388 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CAPN3P20807 821 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 UQCRC2P22695 453 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CDKN2CP42773 168 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ST13P50502 369 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SSR4P51571 173 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NR0B1P51843 470 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MFAP5Q13361 173 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MAPRE2Q15555 327 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNHIT3Q15649 155 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NNATQ16517 81 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TMEM64Q6YI46 380 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LGI4Q8N135 537 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 BEST3Q8N1M1 668 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CLEC4FQ8N1N0 589 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C9orf43Q8TAL5 461 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SFXN5Q8TD22 340 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 BCAS4Q8TDM0 211 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TM9SF4Q92544 642 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LMF1Q96S06 567 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NTMQ9P121 344 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TP53TG5Q9Y2B4 290 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 YARS2Q9Y2Z4 477 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NDUFAF1Q9Y375 327 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF451Q9Y4E5 1061 aa13.41□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SLC22A2O15244 555 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 F10P00742 488 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CHI3L1P36222 383 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CASRP41180 1078 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PRIM2P49643 509 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 NRG3P56975 720 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ARG2P78540 354 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ANGPTL8Q6UXH0 198 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 WDR53Q7Z5U6 358 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TAGAPQ8N103 731 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TMEM156Q8N614 296 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 C17orf47Q8NEP4 570 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 GOT1L1Q8NHS2 421 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SLC22A8Q8TCC7 542 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TSPEARQ8WU66 669 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ASB15Q8WXK1 588 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 JADE3Q92613 823 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 GTF2H4Q92759 462 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TP53INP1Q96A56 240 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZBTB20Q9HC78 741 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 SERHLQ9NQF3 203 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ZNF71Q9NQZ8 489 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 TUBD1Q9UJT1 453 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LEF1Q9UJU2 399 aaPredicted RBP13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 ERVK-11Q9UQG0 969 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 PCDHGB7Q9Y5F8 929 aa13.4□□□□□ -0.26
TNFRSF1A-216ENST00000543995 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ASPDHA6ND91 283 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DCTN3O75935 186 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KRT34O76011 436 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 KCNH1O95259 989 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PSMG1O95456 288 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 WDPCPO95876 746 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PPICP45877 212 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 CORO7P57737 925 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 DCAF7P61962 342 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 OC90Q02509 493 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 GAB1Q13480 694 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 TLR1Q15399 786 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 PIGGQ5H8A4 983 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 MFSD12Q6NUT3 480 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ASB18Q6ZVZ8 466 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ARMC10Q8N2F6 343 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZADH2Q8N4Q0 377 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 ZNF441Q8N8Z8 693 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 FBXO30Q8TB52 745 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
TNFRSF1A-216ENST00000543995 LRRC37BQ96QE4 947 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms