RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 UBL7Q96S82 380 aaPredicted RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 ITPAQ9BY32 194 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 TRIM4Q9C037 500 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 EPS8L2Q9H6S3 715 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 FOLH1BQ9HBA9 442 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 C3orf14Q9HBI5 128 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 SAR1AQ9NR31 198 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 PLA2G3Q9NZ20 509 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 ABI3Q9P2A4 366 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 ERVK-11Q9UQG0 969 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 HEMK1Q9Y5R4 338 aaPredicted RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 ZFYVE26Q68DK2 2539 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 ATRXP46100 2492 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 CCDC154A6NI56 674 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 PSMG1O95456 288 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 WDPCPO95876 746 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 F10P00742 488 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 SFTPCP11686 197 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 SOAT1P35610 550 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 CCT3P49368 545 aaKnown RBP12.61□□□□□ -0.39
SP140-213ENST00000543928 SSR4P51571 173 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 NR0B1P51843 470 aaKnown RBP12.61□□□□□ -0.39
SP140-213ENST00000543928 PRKAG1P54619 331 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 PRR5P85299 388 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 LRRC74AQ0VAA2 488 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 IGFL3Q6UXB1 125 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 TMEM64Q6YI46 380 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 MSANTD1Q6ZTZ1 278 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 PIGWQ7Z7B1 504 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 NUP43Q8NFH3 380 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 OR5AK3PQ8NH89 298 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 SFXN5Q8TD22 340 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 SPDL1Q96EA4 605 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 MS4A4EQ96PG1 132 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 INPP5KQ9BT40 448 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 NMUR2Q9GZQ4 415 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 RMND5AQ9H871 391 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 EQTNQ9NQ60 294 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 ZCCHC3Q9NUD5 404 aaKnown RBP12.61□□□□□ -0.39
SP140-213ENST00000543928 MRGBPQ9NV56 204 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 NTMQ9P121 344 aa12.61□□□□□ -0.39
SP140-213ENST00000543928 YARS2Q9Y2Z4 477 aaKnown RBP12.61□□□□□ -0.39
SP140-213ENST00000543928 TLN1Q9Y490 2541 aaKnown RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ZNF354AO60765 605 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 ERN1O75460 977 aaKnown RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 CAPN3P20807 821 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 CDKN2CP42773 168 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 CD97P48960 835 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 DCAF7P61962 342 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ARG2P78540 354 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 TP53BP2Q13625 1128 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 TUBA3CQ13748 450 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 NNATQ16517 81 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 PIGGQ5H8A4 983 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ZNF468Q5VIY5 522 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 TUBA3EQ6PEY2 450 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 SLC2A7Q6PXP3 512 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 CLEC4FQ8N1N0 589 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 TMEM156Q8N614 296 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 C17orf47Q8NEP4 570 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 OR56A1Q8NGH5 318 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 GOT1L1Q8NHS2 421 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ASB15Q8WXK1 588 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 TP53INP1Q96A56 240 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 GIMAP5Q96F15 307 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ITCHQ96J02 903 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 UTP23Q9BRU9 249 aaKnown RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 RNF32Q9H0A6 362 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 NXF5Q9H1B4 397 aaKnown RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 SLC25A18Q9H1K4 315 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 SLC52A3Q9NQ40 469 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
SP140-213ENST00000543928 GPR55Q9Y2T6 319 aaPredicted RBP12.6□□□□□ -0.39
SP140-213ENST00000543928 RNF103-CHMP3A0A140T963 221 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 ASPDHA6ND91 283 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 OR5H15A6NDH6 313 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 RFXANKO14593 260 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 ATXN7O15265 892 aaPredicted RBP12.59□□□□□ -0.39
SP140-213ENST00000543928 DPM1O60762 260 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 CCDC22O60826 627 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 OR6B1O95007 311 aa12.59□□□□□ -0.39
SP140-213ENST00000543928 NADKO95544 446 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms