RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 JPH3Q8WXH2 748 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 TM9SF4Q92544 642 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 OTUB2Q96DC9 234 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 C1GALT1C1Q96EU7 318 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 RNFT2Q96EX2 444 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 SORBS1Q9BX66 1292 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 JAM3Q9BX67 310 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 PINK1Q9BXM7 581 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 OR2AG1Q9H205 316 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 DIABLOQ9NR28 239 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 SLC19A2O60779 497 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 SLC43A1O75387 559 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 PAPLNO95428 1278 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 RPN2P04844 631 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 FAM157BP0CG42 384 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 NR2F1P10589 423 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 SLC2A2P11168 524 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 DRD2P14416 443 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 GZMKP49863 264 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 FAPQ12884 760 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 DSG2Q14126 1118 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 BCDIN3DQ7Z5W3 292 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 CAMKK1Q8N5S9 505 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 CELF5Q8N6W0 485 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 OR52P1PQ8NH57 321 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 RFKQ969G6 155 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 RGMAQ96B86 450 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 NUS1Q96E22 293 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 OR52A5Q9H2C5 316 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 OR51I1Q9H343 314 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 RPRD1BQ9NQG5 326 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 MED17Q9NVC6 651 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 ASB6Q9NWX5 421 aa12.95□□□□□ -0.34
VPS33A-208ENST00000543633 NDRG2Q9UN36 371 aaKnown RBP12.95□□□□□ -0.34
VPS33A-208ENST00000543633 NDUFS4O43181 175 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 AKAP8O43823 692 aaKnown RBP12.94□□□□□ -0.34
VPS33A-208ENST00000543633 HLA-DPB1P04440 258 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 C8AP07357 584 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 IL12RB1P42701 662 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 GALK2Q01415 458 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 DMPKQ09013 629 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 TSPAN31Q12999 210 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 PIN1Q13526 163 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-208ENST00000543633 SYPL1Q16563 259 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 LILRA6Q6PI73 481 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 BHLHB9Q6PI77 547 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 RASSF6Q6ZTQ3 369 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 Q8N402 240 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 ATP6V1C2Q8NEY4 427 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 OR52N1Q8NH53 320 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 ANGPTL6Q8NI99 470 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 WFIKKN2Q8TEU8 576 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 ACOT12Q8WYK0 555 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 MOAP1Q96BY2 351 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
VPS33A-208ENST00000543633 KCNJ15Q99712 375 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 TMEM106CQ9BVX2 250 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 BTBD1Q9H0C5 482 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
VPS33A-208ENST00000543633 ZBP1Q9H171 429 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 DDX31Q9H8H2 851 aaKnown RBP12.94□□□□□ -0.34
VPS33A-208ENST00000543633 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
VPS33A-208ENST00000543633 DENND4AQ7Z401 1863 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 PRAMEF27A3QJZ7 478 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 HNRNPCL3B7ZW38 293 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 M0R3H8 397 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 NRG2O14511 850 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-208ENST00000543633 POP7O75817 140 aaKnown RBP12.93□□□□□ -0.34
VPS33A-208ENST00000543633 FGBP02675 491 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 PRNPP04156 253 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 HNRNPCL4P0DMR1 293 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 OR12D1P0DN82 309 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 CSF2RAP15509 400 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 GJA1P17302 382 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 EVX1P49640 407 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 CCR8P51685 355 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 ARFIP1P53367 373 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 EPHA5P54756 1037 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 FABP5Q01469 135 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 BDH1Q02338 343 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 EFR3AQ14156 821 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 TATDN3Q17R31 274 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 CNIH2Q6PI25 160 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 ZNF547Q8IVP9 402 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 ARIH2OSQ8N7S6 290 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 UBASH3BQ8TF42 649 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 F2RL3Q96RI0 385 aa12.93□□□□□ -0.34
VPS33A-208ENST00000543633 MARVELD1Q9BSK0 173 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms