RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ACVR2AP27037 513 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PTGER4P35408 488 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PTGDSP41222 190 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CASP3P42574 277 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 MAN2A2P49641 1150 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NAA20P61599 178 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ACSM2AQ08AH3 577 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 KIAA0040Q15053 153 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TBCELQ5QJ74 424 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 HLA-DQA1Q5Y7H0 255 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ACSM2BQ68CK6 577 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TMEM81Q6P7N7 255 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CCDC71Q8IV32 467 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PRR22Q8IZ63 422 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 OR52R1Q8NGF1 315 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 OR2W6PQ8NHA6 318 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 RDH11Q8TC12 318 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DIO2Q92813 273 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 HSPBAP1Q96EW2 488 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 LCORQ96JN0 433 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 RILPQ96NA2 401 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SPOCK3Q9BQ16 436 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DOHHQ9BU89 302 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 EBPLQ9BY08 206 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ENKD1Q9H0I2 346 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 BOKQ9UMX3 212 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CFL2Q9Y281 166 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GPR55Q9Y2T6 319 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ZNF780BQ9Y6R6 833 aa12.01□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TRGV5A0A0B4J1U4 118 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GNG14A0A1W2PPG7 69 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SMIM23A6NLE4 172 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 MYO1GB0I1T2 1018 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NPIPB8E9PQR5 432 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 H3BQF6 201 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 COPEO14579 308 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ACOX3O15254 700 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TOXO94900 526 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SNX4O95219 450 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 HPNP05981 417 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SNRPB2P08579 225 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ANXA4P09525 319 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NUDT17P0C025 328 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CT45A8P0DMV1 189 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CT45A9P0DMV2 189 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DRD5P21918 477 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ADH7P40394 386 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PPICP45877 212 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NRG3P56975 720 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 VSNL1P62760 191 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 BTKQ06187 659 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NNATQ16517 81 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CT45A2Q5DJT8 189 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 FAM71E1Q6IPT2 247 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ZNF585AQ6P3V2 769 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ACAD11Q709F0 780 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NUP54Q7Z3B4 507 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 C10orf107Q8IVU9 208 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 OR9A2Q8NGT5 310 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NEIL3Q8TAT5 605 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ASB5Q8WWX0 329 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 RND1Q92730 232 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 KAT2AQ92830 837 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SARAFQ96BY9 339 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ERP27Q96DN0 273 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 VSTM2LQ96N03 204 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GNRHR2Q96P88 292 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TTYH2Q9BSA4 534 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GATA5Q9BWX5 397 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 UCK2Q9BZX2 261 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SLC6A15Q9H2J7 730 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SLC35C2Q9NQQ7 365 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 NPDC1Q9NQX5 325 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TAS2R7Q9NYW3 318 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 EHD3Q9NZN3 535 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 BCAP29Q9UHQ4 241 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ACAD8Q9UKU7 415 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PCDHGB3Q9Y5G1 929 aa12□□□□□ -0.49
TNFRSF1A-215ENST00000543359 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CCDC151A5D8V7 595 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PLOD3O60568 738 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 UGT2B11O75310 529 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 UROSP10746 265 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 COX6B1P14854 86 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DDCP20711 480 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PRPH2P23942 346 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CHRNB4P30926 498 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GSTM5P46439 218 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TMED10P49755 219 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CDK9P50750 372 aaKnown RBP11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DCAF7P61962 342 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 HEPACAMQ14CZ8 416 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PCLAFQ15004 111 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 LIPMQ5VYY2 423 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TMEM198Q66K66 360 aa11.99□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TIGD3Q6B0B8 471 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms