RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 STK17BO94768 372 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 SUPT7LO94864 414 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 NTRK1P04629 796 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 SERPIND1P05546 499 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 KLK3P07288 261 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 C1QTNF9P0C862 333 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 CREB1P16220 341 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PAX7P23759 505 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ARSFP54793 590 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 MAGOHP61326 146 aaKnown RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 NAA20P61599 178 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 REEP5Q00765 189 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 MVKQ03426 396 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 RAB32Q13637 225 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 DOC2AQ14183 400 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PCLAFQ15004 111 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 MEP1BQ16820 701 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 FAM214AQ32MH5 1076 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 TNFAIP8L3Q5GJ75 292 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 C9orf152Q5JTZ5 239 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF678Q5SXM1 525 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 AGBL2Q5U5Z8 902 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PRAMEF17Q5VTA0 474 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 LIPJQ5W064 366 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 TMIGD1Q6UXZ0 262 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 MED25Q71SY5 747 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ASPGQ86U10 573 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ZFAND4Q86XD8 727 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 CSNK1A1LQ8N752 337 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 CCNYL1Q8N7R7 359 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 DRAXINQ8NBI3 349 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 CAMKVQ8NCB2 501 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 HIPK4Q8NE63 616 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 TTLQ8NG68 377 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF483Q8TF39 744 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 SLC13A3Q8WWT9 602 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 UBE2E3Q969T4 207 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 FAM162AQ96A26 154 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 MIEF2Q96C03 454 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 L3HYPDHQ96EM0 354 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 OR2A5Q96R48 311 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PITHD1Q9GZP4 211 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 DRC3Q9H069 523 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ACTR8Q9H981 624 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 ACTR5Q9H9F9 607 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 TXLNGQ9NUQ3 528 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 COPG2Q9UBF2 871 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 DKK4Q9UBT3 224 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 SLC25A10Q9UBX3 287 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 PCTPQ9UKL6 214 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 DSPP15924 2871 aaKnown RBP4.81□□□□□ -1.64
CLIP1-217ENST00000543205 KNTC1P50748 2209 aa4.81□□□□□ -1.64
CLIP1-217ENST00000543205 SMIM30A4D0T7 59 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 ANKDD1BA6NHY2 528 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 OR6C76A6NM76 312 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 J3KTA2 159 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 AGPSO00116 658 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TM9SF1O15321 606 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 PRPF4O43172 522 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLIP1-217ENST00000543205 NDUFS4O43181 175 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 RAD1O60671 282 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 UGDHO60701 494 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TRIM13O60858 407 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 ZWINTO95229 277 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 CLDN9O95484 217 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 PAHP00439 452 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 OTCP00480 354 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 STATHP02808 62 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 RPS17P08708 135 aaKnown RBP4.8□□□□□ -1.64
CLIP1-217ENST00000543205 SLC35G6P0C7Q6 338 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 PCNAP12004 261 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF28P17035 718 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 EPORP19235 508 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 ALDH3A1P30838 453 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 AHRP35869 848 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 NAGLUP54802 743 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 CDH13P55290 713 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 DNAJB13P59910 316 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 CYP4F2P78329 520 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 PHEXP78562 749 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 RGS1Q08116 209 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 RAB39AQ14964 217 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 NDUFA9Q16795 377 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 HKDC1Q2TB90 917 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 UNC50Q53HI1 259 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TOR1AIP1Q5JTV8 583 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 MANEAQ5SRI9 462 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 LIPMQ5VYY2 423 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 BICRALQ6AI39 1079 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TTC19Q6DKK2 380 aaPredicted RBP4.8□□□□□ -1.64
CLIP1-217ENST00000543205 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 SLC25A24Q6NUK1 477 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 MED27Q6P2C8 311 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 TTLL10Q6ZVT0 673 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 RPS27LQ71UM5 84 aaKnown RBP4.8□□□□□ -1.64
CLIP1-217ENST00000543205 C10orf107Q8IVU9 208 aa4.8□□□□□ -1.64
CLIP1-217ENST00000543205 ZNF248Q8NDW4 579 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms